RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 DAP3P51398 398 aaKnown RBP7.37□□□□□ -1.23
CD44-208ENST00000428726 NOVA1P51513 510 aaKnown RBP7.37□□□□□ -1.23
CD44-208ENST00000428726 DLX5P56178 289 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 SPATA46Q5T0L3 261 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 GLT8D1Q68CQ7 371 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 UNQ6126/PRO20091Q6UXV3 157 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 TMEM200AQ86VY9 491 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 IL22RA1Q8N6P7 574 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 TTC9Q92623 222 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 ZNF75AQ96N20 296 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 ULBP2Q9BZM5 246 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 SLC6A15Q9H2J7 730 aa7.37□□□□□ -1.23
CD44-208ENST00000428726 MED19A0JLT2 244 aaPredicted RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 NPIPB13A6NJU9 1138 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 NPIPB4C9JG80 1138 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 ZNF208O43345 1280 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 XRCC3O43542 346 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 PGA4P0DJD7 388 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 PGA3P0DJD8 388 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 RRASP10301 218 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 FCGR2AP12318 317 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 TAF9Q16594 264 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 GABRG1Q8N1C3 465 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 PAQR4Q8N4S7 273 aaPredicted RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 ANGPTL6Q8NI99 470 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 ARHGAP5-AS1Q96IT6 56 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 PARP12Q9H0J9 701 aaKnown RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 PRMT8Q9NR22 394 aaPredicted RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 CYB5R1Q9UHQ9 305 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 TRAV39A0A0B4J263 110 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 SLC17A2O00624 439 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 TGM6O95932 706 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 CYB5AP00167 134 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 CSRP1P21291 193 aaKnown RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 MSX1P28360 303 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 HGFACQ04756 655 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 HLXQ14774 488 aaPredicted RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 METTL11BQ5VVY1 283 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 ANKRD16Q6P6B7 361 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 DNM1P46Q6ZS02 220 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 C6orf201Q7Z4U5 140 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 GCNT2Q8N0V5 402 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 MARCH1Q8TCQ1 289 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 NAT6Q93015 286 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 FBXO17Q96EF6 278 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 SAV1Q9H4B6 383 aaPredicted RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 TMEM231Q9H6L2 316 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 TAS2R8Q9NYW2 309 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 GSKIPQ9P0R6 139 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 TCFL5Q9UL49 500 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 PIGLQ9Y2B2 252 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 KCNK7Q9Y2U2 307 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 KCNMB2Q9Y691 235 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 NCKAP5O14513 1909 aa7.36□□□□□ -1.23
CD44-208ENST00000428726 SPTBN1Q01082 2364 aaKnown RBP7.36□□□□□ -1.23
CD44-208ENST00000428726 LINC00862A6NCI5 91 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 ZNF736B4DX44 427 aaPredicted RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 MCRIP1C9JLW8 97 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 TP53I11O14683 189 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 RAD51DO75771 328 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 HLA-HP01893 362 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 TMEM225BP0DP42 221 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 PGAM2P15259 253 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 BDKRB2P30411 391 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 FAUP35544 74 aaKnown RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 TMEM17Q86X19 198 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 NOXO1Q8NFA2 376 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 OR1M1Q8NGA1 313 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 FNDC9Q8TBE3 224 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 RNF138Q8WVD3 245 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 POTEKPQ9BYX7 375 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 SLC17A5Q9NRA2 495 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 FAM206AQ9NX38 181 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 LRFN1Q9P244 771 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 C19orf25Q9UFG5 118 aaPredicted RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 EXPH5Q8NEV8 1989 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 HEATR1Q9H583 2144 aaKnown RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 A0A0A6YYD4 124 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 IGKV1-9A0A0C4DH69 117 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 A0A1B0GUH1 482 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 SPAARA0A1B0GVQ0 90 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 hCG_1807616A0A1W2PRN6 198 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 SHOXO15266 292 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 ADAP1O75689 374 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 ONECUT2O95948 504 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 HLA-AP01891 365 aaKnown RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 P04436 131 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 NMBP08949 121 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 MAGEA5P43359 124 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 CLDN15P56746 228 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 CARD18P57730 90 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 ACER2Q5QJU3 275 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 TSPO2Q5TGU0 170 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 OR51T1Q8NGJ9 327 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 ELP5Q8TE02 316 aa7.35□□□□□ -1.23
CD44-208ENST00000428726 CPNE2Q96FN4 548 aaPredicted RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 PAPOLGQ9BWT3 736 aaKnown RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 ESRP2Q9H6T0 727 aaKnown RBP7.35□□□□□ -1.23
CD44-208ENST00000428726 IFT46Q9NQC8 304 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms