RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 WFDC1Q9HC57 220 aa14.3□□□□□ -0.12
C9orf3-206ENST00000428313 HIF3AQ9Y2N7 669 aa14.3□□□□□ -0.12
C9orf3-206ENST00000428313 CTSVO60911 334 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 BPNT1O95861 308 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 SPTBP11277 2137 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 GNB3P16520 340 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 RND3P61587 244 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 SPOCK1Q08629 439 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 SLC16A14Q7RTX9 510 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 OR2L8Q8NGY9 312 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 FNDC9Q8TBE3 224 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 NUS1Q96E22 293 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 IGSF21Q96ID5 467 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 CAPN10Q9HC96 672 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 CYP8B1Q9UNU6 501 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 TRBV23OR9-2A0A075B6M9 112 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.29□□□□□ -0.12
C9orf3-206ENST00000428313 ABLIM3O94929 683 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 UNC119Q13432 240 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 MEP1BQ16820 701 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 ZNF774Q6NX45 483 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 CATSPERDQ86XM0 798 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 STT3BQ8TCJ2 826 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 FBLN5Q9UBX5 448 aa14.29□□□□□ -0.12
C9orf3-206ENST00000428313 HEATR5AQ86XA9 2040 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 CLDN34H7C241 214 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 PNPP00491 289 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 TIMP1P01033 207 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 GUSBP08236 651 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 GIMD1P0DJR0 217 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 CPMP14384 443 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 CSF2RAP15509 400 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 RAC1P63000 192 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 HLA-DRB3P79483 266 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 QRFPP83859 136 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
C9orf3-206ENST00000428313 ZNF506Q5JVG8 444 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 AADACL3Q5VUY0 350 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 METRNLQ641Q3 311 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 SGPP2Q8IWX5 399 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 NOXO1Q8NFA2 376 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 OSGIN2Q9Y236 505 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 FANCMQ8IYD8 2048 aa14.28□□□□□ -0.12
C9orf3-206ENST00000428313 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-206ENST00000428313 RENP00797 406 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 THEGLP0DJG4 465 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 CCKARP32238 428 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 PDLIM4P50479 330 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 CTXN1P60606 82 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 BTN3A2P78410 334 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 ROM1Q03395 351 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.12
C9orf3-206ENST00000428313 MFSD9Q8NBP5 474 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 OR10G4Q8NGN3 311 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 OR4X1Q8NH49 305 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 LIPHQ8WWY8 451 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 EMG1Q92979 244 aaKnown RBP14.27□□□□□ -0.12
C9orf3-206ENST00000428313 SH3BGRL3Q9H299 93 aa14.27□□□□□ -0.12
C9orf3-206ENST00000428313 LSM5Q9Y4Y9 91 aaKnown RBP14.27□□□□□ -0.12
C9orf3-206ENST00000428313 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 SCAF4O95104 1147 aaKnown RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 GSTP1P09211 210 aaKnown RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 OR4A8P0C604 315 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 PI3P19957 117 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 GJA4P35212 333 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 RBMXP38159 391 aaKnown RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 RPS27P42677 84 aaKnown RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 GRK6P43250 576 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 HSF1Q00613 529 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 PNRC1Q12796 327 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 TAF1CQ15572 869 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 DMRTA1Q5VZB9 504 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 TEX38Q6PEX7 206 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 TMEM182Q6ZP80 229 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 ZAR1Q86SH2 424 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 FGGYQ96C11 551 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.13
C9orf3-206ENST00000428313 LRFN1Q9P244 771 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 HHLA2Q9UM44 414 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 SRPK3Q9UPE1 567 aa14.27□□□□□ -0.13
C9orf3-206ENST00000428313 A6NIZ1 184 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 PPP5D1E7EU14 171 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 IFNA21P01568 189 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OPN1MWP04001 364 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OPN1MW2P0DN77 364 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OPN1MW3P0DN78 364 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 GABRA3P34903 492 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 RAP1BP61224 184 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ICAM4Q14773 271 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ALG10Q5BKT4 473 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 CYB561D1Q8N8Q1 229 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OR13C3Q8NGS6 347 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 OR5H2Q8NGV7 314 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 NEK7Q8TDX7 302 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ACY3Q96HD9 319 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 MRGPRX4Q96LA9 322 aa14.26□□□□□ -0.13
C9orf3-206ENST00000428313 ZNF558Q96NG5 402 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms