RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 CNN2Q99439 309 aaKnown RBP17.29■□□□□ 0.36
HSPG2-205ENST00000427897 C9orf16Q9BUW7 83 aa17.29■□□□□ 0.36
HSPG2-205ENST00000427897 DCLRE1BQ9H816 532 aa17.29■□□□□ 0.36
HSPG2-205ENST00000427897 ERVK-18Q9QC07 812 aa17.29■□□□□ 0.36
HSPG2-205ENST00000427897 ZNF391Q9UJN7 358 aa17.29■□□□□ 0.36
HSPG2-205ENST00000427897 KLHDC2Q9Y2U9 406 aa17.29■□□□□ 0.36
HSPG2-205ENST00000427897 TMEM269A0A1B0GVZ9 245 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 SLC22A31A6NKX4 558 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 LGALS8O00214 317 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 NDUFA2O43678 99 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 RIDAP52758 137 aaKnown RBP17.28■□□□□ 0.36
HSPG2-205ENST00000427897 PSMA6P60900 246 aaKnown RBP17.28■□□□□ 0.36
HSPG2-205ENST00000427897 SLX4IPQ5VYV7 408 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 KDM4DQ6B0I6 523 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 DEGS2Q6QHC5 323 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 LYPD2Q6UXB3 125 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 ZNF826PQ6ZT77 177 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 TMEM163Q8TC26 289 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 RAB40AQ8WXH6 277 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 PIGCQ92535 297 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 CIB1Q99828 191 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 RTL8AQ9BWD3 113 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 ZNF319Q9P2F9 582 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 OPN4Q9UHM6 478 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 GTF2A1LQ9UNN4 478 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 RHBDD3Q9Y3P4 386 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 ORC6Q9Y5N6 252 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 MPC1Q9Y5U8 109 aa17.28■□□□□ 0.36
HSPG2-205ENST00000427897 OOEPA6NGQ2 149 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 ZAR1LA6NP61 321 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 ADAM20O43506 726 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 ZNF254O75437 659 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 MAP2K3P46734 347 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 NXNL2Q5VZ03 156 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 GID4Q8IVV7 300 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 OR8B12Q8NGG6 310 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 C22orf15Q8WYQ4 148 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 EME1Q96AY2 570 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 TTTY10Q9BZA0 68 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 RIBC2Q9H4K1 309 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 ABCB9Q9NP78 766 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 NUP50Q9UKX7 468 aa17.27■□□□□ 0.36
HSPG2-205ENST00000427897 ARHGAP32A7KAX9 2087 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 CCDC182A6NF36 153 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ACOD1A6NK06 481 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ZNF850A8MQ14 1090 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ZNF670-ZNF695F2Z2N8 137 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 TRIM77I1YAP6 450 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 M0R129 80 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 PHYHO14832 338 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 VENTXO95231 258 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 PTBP3O95758 552 aaKnown RBP17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ATP6V1E1P36543 226 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 NPY4RP50391 375 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 PRDX4Q13162 271 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ZNF829Q3KNS6 432 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-205ENST00000427897 CD276Q5ZPR3 534 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 C12orf73Q69YU5 71 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 BCDIN3DQ7Z5W3 292 aaKnown RBP17.26■□□□□ 0.35
HSPG2-205ENST00000427897 THAP5Q7Z6K1 395 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 ZNF679Q8IYX0 411 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 MNTQ99583 582 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 SLC6A7Q99884 636 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 USE1Q9NZ43 259 aa17.26■□□□□ 0.35
HSPG2-205ENST00000427897 GYPAP02724 150 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 ALDH3A2P51648 485 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 MICBQ29980 383 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 WDR25Q64LD2 544 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-205ENST00000427897 ZBTB49Q6ZSB9 765 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 SLC35F2Q8IXU6 374 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 CBR4Q8N4T8 237 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 OR1M1Q8NGA1 313 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 LRRC29Q8WV35 223 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 RNF170Q96K19 258 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 OR8B4Q96RC9 309 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 NUDT16L1Q9BRJ7 211 aaKnown RBP17.25■□□□□ 0.35
HSPG2-205ENST00000427897 MS4A7Q9GZW8 240 aaPredicted RBP17.25■□□□□ 0.35
HSPG2-205ENST00000427897 RNPEPL1Q9HAU8 725 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 SVEP1Q4LDE5 3571 aa17.25■□□□□ 0.35
HSPG2-205ENST00000427897 IGHV2-70DA0A0C4DH43 119 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 EI24O14681 340 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 ALPLP05186 524 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 EPHA2P29317 976 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 DCTDP32321 178 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 CXCR4P61073 352 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 USP43Q70EL4 1123 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 ZDHHC23Q8IYP9 409 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 GALNT4Q8N4A0 578 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 PBOV1Q9GZY1 135 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 C8orf4Q9NR00 106 aa17.24■□□□□ 0.35
HSPG2-205ENST00000427897 IGHV3OR15-7A0A075B7D8 119 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 MTRF1O75570 445 aaKnown RBP17.23■□□□□ 0.35
HSPG2-205ENST00000427897 ACTG1P63261 375 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 HOXA4Q00056 320 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-205ENST00000427897 ROM1Q03395 351 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 PAX8Q06710 450 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 POU4F2Q12837 409 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 AADACL4Q5VUY2 407 aa17.23■□□□□ 0.35
HSPG2-205ENST00000427897 ZNF322Q6U7Q0 402 aaPredicted RBP17.23■□□□□ 0.35
HSPG2-205ENST00000427897 GCSAMQ8N6F7 178 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 386.7 ms