RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 WNK2Q9Y3S1 2297 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 IGHV3OR16-10A0A075B7F0 116 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 PSMD9O00233 223 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 PRKYO43930 277 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 MITFO75030 526 aaPredicted RBP15.35■□□□□ 0.05
GPC1-205ENST00000427506 GYPAP02724 150 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 IL5RAQ01344 420 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 CD276Q5ZPR3 534 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 AMIGO2Q86SJ2 522 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 OR1M1Q8NGA1 313 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 OR8B12Q8NGG6 310 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 LRRC29Q8WV35 223 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 GCDHQ92947 438 aaPredicted RBP15.35■□□□□ 0.05
GPC1-205ENST00000427506 MROQ9BYG7 248 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 PPP1R3EQ9H7J1 279 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 CTSZQ9UBR2 303 aa15.35■□□□□ 0.05
GPC1-205ENST00000427506 IGHV3OR15-7A0A075B7D8 119 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 CCDC182A6NF36 153 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 ZNF850A8MQ14 1090 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 ENSAO43768 121 aaKnown RBP15.34■□□□□ 0.05
GPC1-205ENST00000427506 CIB2O75838 187 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 PPIAL4GP0DN37 164 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 FCGR1AP12314 374 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 POU4F2Q12837 409 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 PRDX4Q13162 271 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 KCTD8Q6ZWB6 473 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 WDR86Q86TI4 376 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 BCL6BQ8N143 479 aaPredicted RBP15.34■□□□□ 0.05
GPC1-205ENST00000427506 TCEANCQ8N8B7 351 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 ZDHHC22Q8N966 263 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 FAM81AQ8TBF8 368 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 LRTOMTQ8WZ04 291 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 PIGCQ92535 297 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 RTL8AQ9BWD3 113 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 TTTY10Q9BZA0 68 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 RNPEPL1Q9HAU8 725 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 ESM1Q9NQ30 184 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 ZNF391Q9UJN7 358 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 MPC1Q9Y5U8 109 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 TMEM14AQ9Y6G1 99 aa15.34■□□□□ 0.05
GPC1-205ENST00000427506 TRAV40A0A0B4J280 105 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 TMEM269A0A1B0GVZ9 245 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 M0R129 80 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 LHBP01229 141 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 IGHV4-38-2P0DP08 117 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 EGR1P18146 543 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 ACKR3P25106 362 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 CSNK2BP67870 215 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 SLX4IPQ5VYV7 408 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 DEGS2Q6QHC5 323 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 MEPCEQ7L2J0 689 aaKnown RBP15.33■□□□□ 0.04
GPC1-205ENST00000427506 BCDIN3DQ7Z5W3 292 aaKnown RBP15.33■□□□□ 0.04
GPC1-205ENST00000427506 COMMD2Q86X83 199 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 FAM90A1Q86YD7 464 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 C11orf53Q8IXP5 236 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 GALNT4Q8N4A0 578 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 ASB17Q8WXJ9 295 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 UPRTQ96BW1 309 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 LYZL4Q96KX0 146 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 HIST1H2AAQ96QV6 131 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 CNN2Q99439 309 aaKnown RBP15.33■□□□□ 0.04
GPC1-205ENST00000427506 RASSF4Q9H2L5 321 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 ABCB9Q9NP78 766 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 ENOPH1Q9UHY7 261 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 IKZF2Q9UKS7 526 aa15.33■□□□□ 0.04
GPC1-205ENST00000427506 C22orf46C9J442 243 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 CDIPTO14735 213 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 TMPRSS2O15393 492 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 ZNF254O75437 659 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 FGF12P61328 243 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 UBA52P62987 128 aaKnown RBP15.32■□□□□ 0.04
GPC1-205ENST00000427506 MICBQ29980 383 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 TEX36Q5VZQ5 186 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 KDM4DQ6B0I6 523 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 WDR82Q6UXN9 313 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 DOK3Q7L591 496 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 TMEM163Q8TC26 289 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 DACT3Q96B18 629 aaPredicted RBP15.32■□□□□ 0.04
GPC1-205ENST00000427506 ITPKCQ96DU7 683 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 DUS3LQ96G46 650 aaKnown RBP15.32■□□□□ 0.04
GPC1-205ENST00000427506 RNF170Q96K19 258 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 IL4I1Q96RQ9 567 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 PKP2Q99959 881 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 GABARAPL1Q9H0R8 117 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 SEMA6AQ9H2E6 1030 aa15.32■□□□□ 0.04
GPC1-205ENST00000427506 ACOD1A6NK06 481 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 SLC22A31A6NKX4 558 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 ZAR1LA6NP61 321 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 TNFRSF13BO14836 293 aaPredicted RBP15.31■□□□□ 0.04
GPC1-205ENST00000427506 CST4P01036 141 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 LIPFP07098 398 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 MUC1P15941 1255 aaPredicted RBP15.31■□□□□ 0.04
GPC1-205ENST00000427506 EPHA2P29317 976 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 MAP2K3P46734 347 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 MTNR1AP48039 350 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 RIDAP52758 137 aaKnown RBP15.31■□□□□ 0.04
GPC1-205ENST00000427506 GMFBP60983 142 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 BAMBIQ13145 260 aa15.31■□□□□ 0.04
GPC1-205ENST00000427506 ZNF829Q3KNS6 432 aaPredicted RBP15.31■□□□□ 0.04
GPC1-205ENST00000427506 NXNL2Q5VZ03 156 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms