RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 TIGD6Q17RP2 521 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF829Q3KNS6 432 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 OR2G6Q5TZ20 316 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 SHEQ5VZ18 495 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 Q6ZSR3 168 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 KRT74Q7RTS7 529 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 MRPL21Q7Z2W9 205 aaKnown RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 PRSS35Q8N3Z0 413 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF485Q8NCK3 441 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 OR51E1Q8TCB6 317 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 SGCDQ92629 289 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 PELI1Q96FA3 418 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 REEP6Q96HR9 211 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 KIRREL1Q96J84 757 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 C4orf36Q96KX1 117 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CNBD2Q96M20 576 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF184Q99676 751 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ALG8Q9BVK2 526 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 RGCCQ9H4X1 137 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 DUSP21Q9H596 190 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 OPA3Q9H6K4 179 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 PPP1R3EQ9H7J1 279 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 BARX1Q9HBU1 254 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CYSLTR2Q9NS75 346 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ACOXLQ9NUZ1 547 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 TMEM100Q9NV29 134 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 PAK1IP1Q9NWT1 392 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 UBAP1Q9NZ09 502 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CGGBP1Q9UFW8 167 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CLEC2DQ9UHP7 191 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 GNG8Q9UK08 70 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 ZDHHC8Q9ULC8 765 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CAB39Q9Y376 341 aaPredicted RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 EXOSC1Q9Y3B2 195 aaKnown RBP6.29□□□□□ -1.4
LINC01049-201ENST00000426840 SNX5Q9Y5X3 404 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CREBBPQ92793 2442 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 MYO9AB2RTY4 2548 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 TACC2O95359 2948 aa6.29□□□□□ -1.4
LINC01049-201ENST00000426840 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 LOC390937A0A1W2PQ73 354 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 PLSCR5A0PG75 271 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 PTGES3LE9PB15 166 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 LYNX1G3V0Z9 82 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 P2RY10O00398 339 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 MLNRO43193 412 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 NCR1O76036 304 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 LALBAP00709 142 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 MT-ND5P03915 603 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 HLA-DPB1P04440 258 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CDK1P06493 297 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 LYNX1P0DP58 116 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CCL1P22362 96 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CFL1P23528 166 aaKnown RBP6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CRHBPP24387 322 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ACKR3P25106 362 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CCR9P51686 369 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 NANOS3P60323 173 aaKnown RBP6.28□□□□□ -1.4
LINC01049-201ENST00000426840 SLC35A2P78381 396 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CCL8P80075 99 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR8B8Q15620 311 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 TSTQ16762 297 aaKnown RBP6.28□□□□□ -1.4
LINC01049-201ENST00000426840 PCGF3Q3KNV8 242 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 WDR38Q5JTN6 314 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 RNLSQ5VYX0 342 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 AHSA2Q719I0 299 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF786Q8N393 782 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 NANOGP1Q8N7R0 232 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF540Q8NDQ6 660 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 BHLHE23Q8NDY6 225 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR56B2PQ8NGI1 322 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR14K1Q8NGZ2 314 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR13G1Q8NGZ3 307 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR2G2Q8NGZ5 317 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 SPRYD4Q8WW59 207 aaPredicted RBP6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ITFG2Q969R8 447 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 MRPL48Q96GC5 212 aaKnown RBP6.28□□□□□ -1.4
LINC01049-201ENST00000426840 DIRC2Q96SL1 478 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 MOB1AQ9H8S9 216 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 GPR84Q9NQS5 396 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 BABAM2Q9NXR7 383 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 SCN3BQ9NY72 215 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ERVK-18Q9QC07 812 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 ZNF391Q9UJN7 358 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 TPRKBQ9Y3C4 175 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 LRRC42Q9Y546 428 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 V9GYS6 101 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 CSMD1Q96PZ7 3565 aa6.28□□□□□ -1.4
LINC01049-201ENST00000426840 OR4C45A6NMZ5 311 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 F5H5P2 479 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 OGG1O15527 345 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 GMDSO60547 372 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 RP2O75695 350 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CST4P01036 141 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ERCC1P07992 297 aaPredicted RBP6.27□□□□□ -1.41
LINC01049-201ENST00000426840 HTR1AP08908 422 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 DAOP14920 347 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 ATP6V1B1P15313 513 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CA6P23280 308 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 CRYBB2P43320 205 aa6.27□□□□□ -1.41
LINC01049-201ENST00000426840 TGM4P49221 684 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms