RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 C1QL2Q7Z5L3 287 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 C1orf210Q8IVY1 113 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 D2HGDHQ8N465 521 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 SLAMF9Q96A28 289 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 MRPS24Q96EL2 167 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 LOC400499M0QZD8 3231 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 CADP27708 2225 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 SPTAN1Q13813 2472 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 IGLV1-36A0A0B4J1U3 117 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 TO15178 435 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 NME2P1O60361 137 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 TTRP02766 147 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 LCATP04180 440 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 EDN3P14138 238 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 CNR1P21554 472 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 DUSP1P28562 367 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 RBMXP38159 391 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 GABREP78334 506 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 RAB32Q13637 225 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 ZNF574Q6ZN55 896 aaPredicted RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 P4HA3Q7Z4N8 544 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 TMEM105Q8N8V8 129 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 PNLDC1Q8NA58 520 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 ADIPOR1Q96A54 375 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 DDIT4LQ96D03 193 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 ZC3H10Q96K80 434 aaKnown RBP11.85□□□□□ -0.51
USP42-203ENST00000426246 UCN2Q96RP3 112 aa11.85□□□□□ -0.51
USP42-203ENST00000426246 A0A1B0GX78 115 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MEGF11A6BM72 1044 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 PSMB6P28072 239 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MICBQ29980 383 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 CLVS2Q5SYC1 327 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 CATSPERDQ86XM0 798 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MISPQ8IVT2 679 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 STOML3Q8TAV4 291 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 CDC6Q99741 560 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 SLC25A21Q9BQT8 299 aaPredicted RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 ALKBH4Q9NXW9 302 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 OR5AC2Q9NZP5 309 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 KIF25Q9UIL4 384 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ALG1L2C9J202 215 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MS4A18H0YCH9 400 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 RAB27BO00194 218 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 LRP3O75074 770 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 LDOC1O95751 146 aaPredicted RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 CLPSP04118 112 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 UNC119Q13432 240 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 HLA-BQ31612 363 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MS4A18Q3C1V0 323 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ABCA11PQ4W5N1 156 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 FAM76BQ5HYJ3 339 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ZNF319Q9P2F9 582 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 TRBV5-7A0A0A0MS05 114 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ZNF814B7Z6K7 855 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 SSX5O60225 188 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 OR2A4O95047 310 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 DAP3P51398 398 aaKnown RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 GUSBP11Q6P575 273 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 SPAG16Q8N0X2 631 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 OR5L1Q8NGL2 311 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 OR2A7Q96R45 310 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 RPS10P5Q9NQ39 176 aa11.84□□□□□ -0.51
USP42-203ENST00000426246 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
USP42-203ENST00000426246 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.51
USP42-203ENST00000426246 NPIPA2E9PIF3 369 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 NPIPA3F8WFD2 350 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 SULT1C2O00338 296 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 C1QL1O75973 258 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 S100A6P06703 90 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
USP42-203ENST00000426246 ZNF273Q14593 569 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 CLINT1Q14677 625 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 FAM122CQ6P4D5 195 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 YRDCQ86U90 279 aaKnown RBP11.83□□□□□ -0.52
USP42-203ENST00000426246 KCNRGQ8N5I3 272 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 EID2Q8N6I1 236 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 OR5M8Q8NGP6 311 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 CHST11Q9NPF2 352 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 RAB22AQ9UL26 194 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 CCL2P13500 99 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 MTCP1P56278 107 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 FGL1Q08830 312 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 C17orf67Q0P5P2 114 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 RPL7L1Q6DKI1 246 aaKnown RBP11.83□□□□□ -0.52
USP42-203ENST00000426246 ACOT7LQ6ZUV0 252 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 CCDC36Q8IYA8 594 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 ALKBH3Q96Q83 286 aaPredicted RBP11.83□□□□□ -0.52
USP42-203ENST00000426246 ARPC5LQ9BPX5 153 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 ZNF581Q9P0T4 197 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 BOD1L1Q8NFC6 3051 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 LAMTOR5O43504 91 aa11.83□□□□□ -0.52
USP42-203ENST00000426246 DRAM2Q6UX65 266 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms