RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RICTORQ6R327 1708 aa2.37□□□□□ -2.03
LINC01040-201ENST00000425048 FLT4P35916 1363 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 PLIN4Q96Q06 1357 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 MEIKINA0A087WXM9 373 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TRAV19A0A0A6YYK7 116 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 NPIPA5A0A0B4J1W7 369 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SERTM2A0A1B0GWG4 89 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TCRBV9S1A1TA0A576 114 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 GSAPA4D1B5 854 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 OR2AT4A6NND4 320 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 YDJCA8MPS7 323 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 NPIPA5E9PKD4 350 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 GFYI3L273 518 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 M0QZ92 97 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 M0R233 179 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 GPR31O00270 319 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SLC16A4O15374 487 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CHST10O43529 356 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SLC37A4O43826 429 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 AIREO43918 545 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 FADS1O60427 444 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CTAG2O75638 210 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 VAMP5O95183 116 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 HSPA4LO95757 839 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 FADS2O95864 444 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CTXN2P0C2S0 81 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SULT1A3P0DMM9 295 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SULT1A4P0DMN0 295 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RALAP11233 206 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 ADCYAP1P18509 176 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CCND3P30281 292 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 YWHABP31946 246 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CSNK1EP49674 416 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 KRTAP12-4P60329 112 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RAB2AP61019 212 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CXCR4P61073 352 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 LSM6P62312 80 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 DEFA5Q01523 94 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TNFRSF17Q02223 184 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 IL18R1Q13478 541 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SURF2Q15527 256 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 DEFB115Q30KQ5 88 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 PTPN20Q4JDL3 420 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RNASE10Q5GAN6 216 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 EOGTQ5NDL2 527 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SAMD4BQ5PRF9 694 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 C9orf64Q5T6V5 341 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 KPRPQ5T749 579 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 LPCAT3Q6P1A2 487 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 FAM199XQ6PEV8 388 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 AFTPHQ6ULP2 937 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 ALKAL1Q6UXT8 129 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM179Q6ZVK1 233 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 GALNTL5Q7Z4T8 443 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SLC26A11Q86WA9 606 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TMEM17Q86X19 198 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 KRTAP13-1Q8IUC0 172 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 C9orf40Q8IXQ3 194 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 FBXO36Q8NEA4 188 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 GMCL1P1Q8NEA9 526 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 DENND6BQ8NEG7 585 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 BPIFCQ8NFQ6 507 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 OR5K1Q8NHB7 308 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 STOML3Q8TAV4 291 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 NEK7Q8TDX7 302 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SELENOMQ8WWX9 145 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 DNAJC19Q96DA6 116 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CMTM7Q96FZ5 175 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 MED8Q96G25 268 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 TAAR1Q96RJ0 339 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 VAT1Q99536 393 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 NDUFAF3Q9BU61 184 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SLC17A9Q9BYT1 436 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RAB34Q9BZG1 259 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CHST5Q9GZS9 411 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 OR51E2Q9H255 320 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 REEP4Q9H6H4 257 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 ALG9Q9H6U8 611 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 WDR55Q9H6Y2 383 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RNF167Q9H6Y7 350 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 EXOSC3Q9NQT5 275 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 DYRK4Q9NR20 520 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 ABCB8Q9NUT2 735 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RBFOX1Q9NWB1 397 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 RBAKQ9NYW8 714 aaPredicted RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 IL19Q9UHD0 177 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CARHSP1Q9Y2V2 147 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 KCNIP3Q9Y2W7 256 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 CDH10Q9Y6N8 788 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 HELZP42694 1942 aaKnown RBP2.36□□□□□ -2.03
LINC01040-201ENST00000425048 MYLKQ15746 1914 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 PHLPP1O60346 1717 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 SLIT2O94813 1529 aa2.36□□□□□ -2.03
LINC01040-201ENST00000425048 NRXN3Q9Y4C0 1643 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 TICRRQ7Z2Z1 1910 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 PLXND1Q9Y4D7 1925 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 WDR90Q96KV7 1748 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 LOC100130705A0A1B0GUX0 176 aa2.35□□□□□ -2.03
LINC01040-201ENST00000425048 A0A1B0GVI7 797 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms