RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 A0A1B0GVI7 797 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 A6NIN4 97 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 OR4C45A6NMZ5 311 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 F5H5P2 479 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 MLNRO43193 412 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 SYT7O43581 403 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CDC14BO60729 498 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 NCR1O76036 304 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 ADH4P08319 380 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 DAOP14920 347 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 EEF1B2P24534 225 aaKnown RBP7.87□□□□□ -1.15
PDGFC-202ENST00000422544 COL8A2P25067 703 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 MAP2K3P46734 347 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CCR9P51686 369 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 RIPPLY1Q0D2K3 151 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 MRPL28Q13084 256 aaKnown RBP7.87□□□□□ -1.15
PDGFC-202ENST00000422544 OR8G1Q15617 311 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 OR8B8Q15620 311 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CARTPTQ16568 116 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CLEC12BQ2HXU8 276 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 RNLSQ5VYX0 342 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 SHEQ5VZ18 495 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 XAF1Q6GPH4 301 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 PRSS57Q6UWY2 283 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 DOK3Q7L591 496 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF525Q8N782 197 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 NANOGP1Q8N7R0 232 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 PLPP7Q8NBV4 271 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF485Q8NCK3 441 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CSNK2A3Q8NEV1 391 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 SEMA6DQ8NFY4 1073 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 OR14K1Q8NGZ2 314 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 OR52N1Q8NH53 320 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 UBASH3BQ8TF42 649 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 DVL3Q92997 716 aaPredicted RBP7.87□□□□□ -1.15
PDGFC-202ENST00000422544 DIRC2Q96SL1 478 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 TMUB1Q9BVT8 246 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CDCA4Q9BXL8 241 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 CCDC90BQ9GZT6 254 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 EGLN1Q9GZT9 426 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 ERGIC3Q9Y282 383 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 LRRC42Q9Y546 428 aa7.87□□□□□ -1.15
PDGFC-202ENST00000422544 TRBV2A0A0J9YWF9 115 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 LOC107986453A0A1B0GWG9 222 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 A0A1B0GWJ7 208 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 LOC390937A0A1W2PQ73 354 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF850A8MQ14 1090 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 MYL12BO14950 172 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 RGS10O43665 173 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 GMDSO60547 372 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 LMX1BO60663 402 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 MTRF1O75570 445 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 DHRS3O75911 302 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ZFPL1O95159 310 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 LALBAP00709 142 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 CST4P01036 141 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 MT-ND2P03891 347 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ISG15P05161 165 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 CD55P08174 381 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 UBCP0CG48 685 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ATP6V1B1P15313 513 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 CCL1P22362 96 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 TNFSF4P23510 183 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 RBMXP38159 391 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 TGM4P49221 684 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 HNRNPA0Q13151 305 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 DOC2BQ14184 412 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 IRF3Q14653 427 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 TMEM244Q5VVB8 128 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 RPL22L1Q6P5R6 122 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF676Q8N7Q3 588 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ZFP41Q8N8Y5 198 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 OR10AC1Q8NH08 325 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ITLN1Q8WWA0 313 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 PIGCQ92535 297 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 RDH5Q92781 318 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 OR2V2Q96R30 315 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 PDCD1LG2Q9BQ51 273 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 ADAT1Q9BUB4 502 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 PAPOLGQ9BWT3 736 aaKnown RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 SLC22A4Q9H015 551 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 SAP30LQ9HAJ7 183 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 IL19Q9UHD0 177 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 BLOC1S6Q9UL45 172 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 PIGLQ9Y2B2 252 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 CACNG2Q9Y698 323 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 SIRT4Q9Y6E7 314 aaPredicted RBP7.86□□□□□ -1.15
PDGFC-202ENST00000422544 V9GYS6 101 aa7.86□□□□□ -1.15
PDGFC-202ENST00000422544 IGHV4-30-2A0A087WSY4 118 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 IGHV1-69-2A0A0G2JMI3 117 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 ZNF816-ZNF321PA0A0X1KG74 233 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 TRIM64A6NGJ6 449 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 TRIM64BA6NI03 449 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 OGG1O15527 345 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 FAHP16930 419 aa7.85□□□□□ -1.15
PDGFC-202ENST00000422544 GNALP38405 381 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms