RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 GDF9O60383 454 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 GLRA1P23415 457 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 PDSS1Q5T2R2 415 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 TMEM71Q6P5X7 295 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 SLC25A47Q6Q0C1 308 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 PGAP1Q75T13 922 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 OR13G1Q8NGZ3 307 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 TSNAXQ99598 290 aaKnown RBP13.92□□□□□ -0.18
CDH1-202ENST00000422392 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
CDH1-202ENST00000422392 OR2S2Q9NQN1 319 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 CYTL1Q9NRR1 136 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 FBLN5Q9UBX5 448 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 SRPK3Q9UPE1 567 aa13.92□□□□□ -0.18
CDH1-202ENST00000422392 IGLV3-12A0A075B6K2 115 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 F5H5K5 113 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 BCAT2O15382 392 aaPredicted RBP13.91□□□□□ -0.18
CDH1-202ENST00000422392 SCGNO76038 276 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 ATG12O94817 140 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 AMY2BP19961 511 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 TBPP20226 339 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 GSK3AP49840 483 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 PLEKHN1Q494U1 663 aaPredicted RBP13.91□□□□□ -0.18
CDH1-202ENST00000422392 FOXRED2Q8IWF2 684 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
CDH1-202ENST00000422392 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 OR51T1Q8NGJ9 327 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 OR5H2Q8NGV7 314 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 ZNF416Q9BWM5 594 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 NMES1Q9C002 83 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 FLVCR1Q9Y5Y0 555 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 IGHV3-15A0A0B4J1V0 119 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 TEX13DA0A0J9YY54 714 aaPredicted RBP13.91□□□□□ -0.18
CDH1-202ENST00000422392 MFNGO00587 321 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 GSTP1P09211 210 aaKnown RBP13.91□□□□□ -0.18
CDH1-202ENST00000422392 SERPINA2P20848 420 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 CLDN17P56750 224 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 CRIP3Q6Q6R5 217 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 LYZL4Q96KX0 146 aa13.91□□□□□ -0.18
CDH1-202ENST00000422392 TMEM218A2RU14 115 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 ETV2O00321 342 aaPredicted RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 CELA2AP08217 269 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 TPT1P13693 172 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 SLC6A9P48067 706 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 TAS2R31P59538 309 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 NKAPLQ5M9Q1 402 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 AADACL3Q5VUY0 350 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 DRAM2Q6UX65 266 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 GALNTL5Q7Z4T8 443 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 CPEB2Q7Z5Q1 589 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 LRRC18Q8N456 261 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 WDSUB1Q8N9V3 476 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 OR2M3Q8NG83 312 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 MOB1AQ9H8S9 216 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 GSKIPQ9P0R6 139 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 ZNF726A6NNF4 738 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 STMND1H3BQB6 276 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 SFT2D2O95562 160 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 HOXB5P09067 269 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 AFF3P51826 1226 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 SNU13P55769 128 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 CSNK2A1P68400 391 aaPredicted RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 AIMP2Q13155 320 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 KISS1Q15726 138 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 SLC25A53Q5H9E4 307 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 GUSBP11Q6P575 273 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 CSNK2A3Q8NEV1 391 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 NUDT16L1Q9BRJ7 211 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 CRB3Q9BUF7 120 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 OR10A2Q9H208 303 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 METTL8Q9H825 291 aaKnown RBP13.9□□□□□ -0.18
CDH1-202ENST00000422392 EHFQ9NZC4 300 aa13.9□□□□□ -0.18
CDH1-202ENST00000422392 F8VVB4 439 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 F8VWA3 439 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 FGF16O43320 207 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 MBTPS2O43462 519 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 WDPCPO95876 746 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 KNG1P01042 644 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 FAHP16930 419 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 NAT1P18440 290 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR3A2P47893 321 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 RAB32Q13637 225 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 VAX1Q5SQQ9 334 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 ARRDC1Q8N5I2 433 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR56B1Q8NGI3 324 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR14K1Q8NGZ2 314 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR6X1Q8NH79 312 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 SLC6A15Q9H2J7 730 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 ELL3Q9HB65 397 aaPredicted RBP13.89□□□□□ -0.19
CDH1-202ENST00000422392 PCDHB16Q9NRJ7 776 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 OR5H15A6NDH6 313 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 BLVRBP30043 206 aaPredicted RBP13.89□□□□□ -0.19
CDH1-202ENST00000422392 PRSS12P56730 875 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 ZNF585AQ6P3V2 769 aa13.89□□□□□ -0.19
CDH1-202ENST00000422392 DOK3Q7L591 496 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms