RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CLDN24A6NM45 220 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM114B3SHH9 223 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 H3BUX3 64 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 FAAHO00519 579 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 HSPB6O14558 160 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 VCYO14598 125 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 EIF3HO15372 352 aaKnown RBP eCLIP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OR2T1O43869 369 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 BCAS1O75363 584 aaPredicted RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 C6orf47O95873 294 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OPN1SWP03999 348 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 THY1P04216 161 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF26P17031 533 aaPredicted RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 GSTM3P21266 225 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 AHCYP23526 432 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 STOMP27105 288 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 MPV17P39210 176 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ANP32AP39687 249 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 CSNK1A1P48729 337 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 GDI2P50395 445 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 RASSF2P50749 326 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ARF6P62330 175 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 COX10Q12887 443 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF273Q14593 569 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 KCNJ8Q15842 424 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SPRNQ5BIV9 151 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ENTPD8Q5MY95 495 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 PHYHD1Q5SRE7 291 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF678Q5SXM1 525 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SIGIRRQ6IA17 410 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 TYW3Q6IPR3 259 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ARL9Q6T311 187 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 PQLC2Q6ZP29 291 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OLIG3Q7RTU3 272 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 HMGN2P46Q86SG4 172 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 CALHM3Q86XJ0 350 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SLC22A9Q8IVM8 553 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM123Q8N131 208 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ACTRT1Q8TDG2 376 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ITLN1Q8WWA0 313 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OR5P2Q8WZ92 322 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SNAPC3Q92966 411 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SLC35G5Q96KT7 338 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 RCHY1Q96PM5 261 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 SH3GL3Q99963 347 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM246Q9BRR3 403 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 MCRIP2Q9BUT9 160 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 EMC6Q9BV81 110 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 OR51I1Q9H343 314 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 CHMP1AQ9HD42 196 aaPredicted RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 CCNB1IP1Q9NPC3 277 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 PNRC2Q9NPJ4 139 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 MAN2C1Q9NTJ4 1040 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 CHCHD3Q9NX63 227 aaKnown RBP3.92□□□□□ -1.78
SFXN1-202ENST00000421887 BAIAP2L1Q9UHR4 511 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 PRDM4Q9UKN5 801 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 MAB21L2Q9Y586 359 aa3.92□□□□□ -1.78
SFXN1-202ENST00000421887 ELOVL7A1L3X0 281 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 MEIOCA2RUB1 952 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 HTR3EA5X5Y0 456 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ANXA2P2A6NMY6 339 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 H3BQF6 201 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 H3BSA7 217 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 RAMP3O60896 148 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SERPINI2O75830 405 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CYB5R3P00387 301 aaPredicted RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CCDC159P0C7I6 412 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SDC1P18827 310 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 AZU1P20160 251 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 IMPDH1P20839 514 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 PAICSP22234 425 aaKnown RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CHATP28329 748 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SRP9P49458 86 aaKnown RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 PPP1CBP62140 327 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 RPL38P63173 70 aaKnown RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 LY6EQ16553 131 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF404Q494X3 552 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 UNC50Q53HI1 259 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 VMO1Q7Z5L0 202 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 NET1Q7Z628 596 aaPredicted RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 TMEM139Q8IV31 216 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF101Q8IZC7 436 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CLIP4Q8N3C7 705 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 LRRC18Q8N456 261 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 CCNYL1Q8N7R7 359 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 OR7A2PQ8NGA2 310 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 OR51G2Q8NGK0 314 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 PSMA8Q8TAA3 256 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ZNF420Q8TAQ5 688 aaPredicted RBP3.91□□□□□ -1.78
SFXN1-202ENST00000421887 FGFBP3Q8TAT2 258 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ROPN1LQ96C74 230 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ISOC1Q96CN7 298 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SSX3Q99909 188 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
SFXN1-202ENST00000421887 ARMC7Q9H6L4 198 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms