RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 IRF2P14316 349 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ATP6V1B1P15313 513 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 MYL12AP19105 171 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ACKR3P25106 362 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 DCKP27707 260 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 CD200P41217 278 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 HSPA13P48723 471 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
BRAT1-202ENST00000421712 MAB21L1Q13394 359 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 MED21Q13503 144 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 PRAMEF6Q5VXH4 476 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 KCTD8Q6ZWB6 473 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 OR11L1Q8NGX0 322 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 TMEM80Q96HE8 168 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 MICU1Q9BPX6 476 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 FGF20Q9NP95 211 aaPredicted RBP13.32□□□□□ -0.28
BRAT1-202ENST00000421712 PIGLQ9Y2B2 252 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 ACANP16112 2415 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 HIVEP1P15822 2718 aa13.32□□□□□ -0.28
BRAT1-202ENST00000421712 TEP1Q99973 2627 aaKnown RBP13.31□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 A0A1B0GWJ7 208 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 LRRC30A6NM36 301 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 SYT7O43581 403 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 XPNPEP2O43895 674 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 DHRS3O75911 302 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 LY6G6DO95868 133 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 HEXAP06865 529 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 RBMXP38159 391 aaKnown RBP13.31□□□□□ -0.28
BRAT1-202ENST00000421712 VHLP40337 213 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-202ENST00000421712 PRDX4Q13162 271 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 TMPRSS11AQ6ZMR5 421 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 Q71RC1 249 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-202ENST00000421712 DOK3Q7L591 496 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 STX19Q8N4C7 294 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 CELF2-AS1Q8N7Q2 184 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 GGHQ92820 318 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 PPP1R3EQ9H7J1 279 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 ISG20L2Q9H9L3 353 aaKnown RBP13.31□□□□□ -0.28
BRAT1-202ENST00000421712 FN3KRPQ9HA64 309 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 ABCB9Q9NP78 766 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 DCAF16Q9NXF7 216 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 ENPP5Q9UJA9 477 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 WIPI2Q9Y4P8 454 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 MPC1Q9Y5U8 109 aa13.31□□□□□ -0.28
BRAT1-202ENST00000421712 CR1P17927 2039 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 FLNAP21333 2647 aaKnown RBP13.3□□□□□ -0.28
BRAT1-202ENST00000421712 A0A096LNT2 108 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 hCG_1807616A0A1W2PRN6 198 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 IFNL4K9M1U5 179 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 CYB5R3P00387 301 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-202ENST00000421712 CST4P01036 141 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 FAHP16930 419 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ETV1P50549 477 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ST3GAL4Q11206 333 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 MPPED2Q15777 294 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 TMEM249Q2WGJ8 235 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 MOB3CQ70IA8 216 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ZDHHC23Q8IYP9 409 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 RDH10Q8IZV5 341 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 C1orf87Q8N0U7 546 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 SYS1Q8N2H4 156 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 PRSS35Q8N3Z0 413 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 OR2G2Q8NGZ5 317 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 HPS1Q92902 700 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ITFG2Q969R8 447 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ERGIC1Q969X5 290 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 PELI1Q96FA3 418 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 RNF170Q96K19 258 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 RTL8AQ9BWD3 113 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 PLEKHA1Q9HB21 404 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 FRRS1LQ9P0K9 344 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 DIMT1Q9UNQ2 313 aaKnown RBP13.3□□□□□ -0.28
BRAT1-202ENST00000421712 EXOSC1Q9Y3B2 195 aaKnown RBP13.3□□□□□ -0.28
BRAT1-202ENST00000421712 NPTNQ9Y639 398 aa13.3□□□□□ -0.28
BRAT1-202ENST00000421712 ZNF469Q96JG9 3925 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-202ENST00000421712 LOC100289279A0A1B0GTE1 492 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 A6NIN4 97 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 TMEM178BH3BS89 294 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 WNT9BO14905 357 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 RRP9O43818 475 aaKnown RBP13.29□□□□□ -0.28
BRAT1-202ENST00000421712 IGLV3-1P01715 115 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 UBCP0CG48 685 aaKnown RBP13.29□□□□□ -0.28
BRAT1-202ENST00000421712 LIMS3P0CW19 117 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 LIMS4P0CW20 117 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 KIR3DL2P43630 455 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 GATA4P43694 442 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 CSNK2BP67870 215 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 ALKBH1Q13686 389 aaKnown RBP13.29□□□□□ -0.28
BRAT1-202ENST00000421712 CEP78Q5JTW2 689 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 C6orf141Q5SZD1 244 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 AHSA2Q719I0 299 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 KLHL36Q8N4N3 616 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 BOLLQ8N9W6 283 aaKnown RBP13.29□□□□□ -0.28
BRAT1-202ENST00000421712 PLPP7Q8NBV4 271 aa13.29□□□□□ -0.28
BRAT1-202ENST00000421712 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms