RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 TAF13Q15543 124 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 DGUOKQ16854 277 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 C2orf68Q2NKX9 166 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 DMRTC1Q5HYR2 192 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 SAMD5Q5TGI4 173 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 HCP5Q6MZN7 132 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 PGBD2Q6P3X8 592 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 DRAM2Q6UX65 266 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 SLC16A9Q7RTY1 509 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ZDHHC21Q8IVQ6 265 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 SPERTQ8NA61 448 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 SLC37A3Q8NCC5 494 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 OR9Q2Q8NGE9 314 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 GNPDA2Q8TDQ7 276 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 REEP6Q96HR9 211 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 PYURFQ96I23 114 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 AJUBAQ96IF1 538 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 GAFA1Q96PS6 74 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 AMELYQ99218 206 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 KCNJ15Q99712 375 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 DCTN5Q9BTE1 182 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 MED20Q9H944 212 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 EFCAB1Q9HAE3 211 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 BRD7Q9NPI1 651 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 KRCC1Q9NPI7 259 aaPredicted RBP6.62□□□□□ -1.35
VIM-202ENST00000421459 TRIM36Q9NQ86 728 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 C14orf119Q9NWQ9 140 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 DNAJC27Q9NZQ0 273 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 ABCD2Q9UBJ2 740 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 PRPF19Q9UMS4 504 aaKnown RBP6.62□□□□□ -1.35
VIM-202ENST00000421459 NOP16Q9Y3C1 178 aaKnown RBP6.62□□□□□ -1.35
VIM-202ENST00000421459 COMMD3-BMI1R4GMX3 469 aa6.62□□□□□ -1.35
VIM-202ENST00000421459 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.61□□□□□ -1.35
VIM-202ENST00000421459 DHRS12A0PJE2 317 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 BTBD17A6NE02 478 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 ANKRD30BLA7E2S9 258 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 H3BUX3 64 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 SLC22A2O15244 555 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 AKR7A2O43488 359 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 IDH3BO43837 385 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 FAM107AO95990 144 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 PAHP00439 452 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 GASTP01350 101 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 MUC1P15941 1255 aaPredicted RBP6.61□□□□□ -1.35
VIM-202ENST00000421459 GABRA5P31644 462 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 TGFBR2P37173 567 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 GSK3AP49840 483 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 TSPAN31Q12999 210 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 CRMP1Q14194 572 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 OXLD1Q5BKU9 147 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 STUMQ69YW2 141 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 HACD2Q6Y1H2 254 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 FAM57BQ71RH2 274 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 PRSS45Q7RTY3 260 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 OR4Q3Q8NH05 313 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 LRTOMTQ8WZ04 291 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 SPSB4Q96A44 273 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 DUS3LQ96G46 650 aaKnown RBP6.61□□□□□ -1.35
VIM-202ENST00000421459 BTBD10Q9BSF8 475 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 RNPEPL1Q9HAU8 725 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 MRGBPQ9NV56 204 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 HAO2Q9NYQ3 351 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 TAS2R1Q9NYW7 299 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.61□□□□□ -1.35
VIM-202ENST00000421459 FBLN5Q9UBX5 448 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 KCNG2Q9UJ96 466 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 SAMD4AQ9UPU9 718 aaKnown RBP6.61□□□□□ -1.35
VIM-202ENST00000421459 WNK1Q9H4A3 2382 aa6.61□□□□□ -1.35
VIM-202ENST00000421459 hCG_38984A0A1B0GV85 526 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 ZNF850A8MQ14 1090 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 GPR37O15354 613 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 RHBDL1O75783 438 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 ALX3O95076 343 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 OPN1MWP04001 364 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 OPN1MW2P0DN77 364 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 OPN1MW3P0DN78 364 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 VSIG10L2P0DP72 767 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 NDUFB7P17568 137 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 SPI1P17947 270 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 EEF1B2P24534 225 aaKnown RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 ACKR3P25106 362 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 POU1F1P28069 291 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 FMO3P31513 532 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 ENTPD1P49961 510 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 UBE2E1P51965 193 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 EFNB2P52799 333 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 ZNF121P58317 390 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 GUCA2AQ02747 115 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 EIF2B1Q14232 305 aaKnown RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 HABP2Q14520 560 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 HERPUD1Q15011 391 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 TIGD6Q17RP2 521 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 NSUN5P1Q3KNT7 163 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 METAP1DQ6UB28 335 aaPredicted RBP6.6□□□□□ -1.35
VIM-202ENST00000421459 Q6ZTK2 550 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 SLC36A1Q7Z2H8 476 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 PIGWQ7Z7B1 504 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 CMTM4Q8IZR5 234 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 KLHDC1Q8N7A1 406 aa6.6□□□□□ -1.35
VIM-202ENST00000421459 ZNRF1Q8ND25 227 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms