RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 ATG101Q9BSB4 218 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 TCFL5Q9UL49 500 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 OR1A2Q9Y585 309 aa7.13□□□□□ -1.27
HMGXB4-202ENST00000418170 FAM221BA6H8Z2 402 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 K7EQS6 105 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 BPNT1O95861 308 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PCP4P48539 62 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 HNF4GQ14541 408 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PCK2Q16822 640 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 COL13A1Q5TAT6 717 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 AADACL3Q5VUY0 350 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PTCRAQ6ISU1 281 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 RHBDD1Q8TEB9 315 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 METTL21AQ8WXB1 218 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 A0A087WZY1 265 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LOC107986453A0A1B0GWG9 222 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 HSD17B6O14756 317 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 GPR75O95800 540 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 CSTAP01040 98 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 HLA-DQA2P01906 255 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 ISG15P05161 165 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PCCBP05166 539 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LINC00271P0C7V0 271 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 AFF3P51826 1226 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 BTG2P78543 158 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SLC10A1Q14973 349 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 KCTD18Q6PI47 426 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 OR52R1Q8NGF1 315 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 ANKRD9Q96BM1 317 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 C8orf44Q96CB5 159 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 R3HDM4Q96D70 268 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 CCNL2Q96S94 520 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 OR14J1Q9UGF5 321 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SUSD2Q9UGT4 822 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LRP12Q9Y561 859 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PDE4DIPQ5VU43 2346 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LATO43561 262 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 IL18BPO95998 194 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SERPINA2P20848 420 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 APOBEC1P41238 236 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 GLIPR1P48060 266 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 DLK1P80370 383 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SP3Q02447 781 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM52Q8NDY8 209 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 RCC1LQ96I51 464 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LMF2Q9BU23 707 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 Q9N2J8 555 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 MTCH2Q9Y6C9 303 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 FOXS1O43638 330 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LMX1BO60663 402 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SRSF10O75494 262 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 GLRA1P23415 457 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 ENPP2Q13822 863 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LANCL3Q6ZV70 420 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SHISA5Q8N114 240 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 APCDD1LQ8NCL9 501 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 OR13G1Q8NGZ3 307 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 BSCL2Q96G97 398 aaPredicted RBP7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 G6PC3Q9BUM1 346 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 SH3BGRL3Q9H299 93 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 WFDC1Q9HC57 220 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 C1orf123Q9NWV4 160 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 FBLN5Q9UBX5 448 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 PITPNC1Q9UKF7 332 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 OSGIN2Q9Y236 505 aa7.12□□□□□ -1.27
HMGXB4-202ENST00000418170 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 RBFOX3A6NFN3 312 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 ZNF860A6NHJ4 632 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 H0YL77 283 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 K7N7A8 449 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 TGOLN2O43493 480 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 GSTP1P09211 210 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 OR5H8P0DN80 308 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 PNMTP11086 282 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 HSD11B1P28845 292 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 CD200P41217 278 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FAM78AQ5JUQ0 283 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 GRASPQ7Z6J2 395 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 CACUL1Q86Y37 369 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 OR5H2Q8NGV7 314 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FNDC9Q8TBE3 224 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 TM4SF19Q96DZ7 209 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 LYRM4Q9HD34 91 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 MRPL22Q9NWU5 206 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 LSM5Q9Y4Y9 91 aaKnown RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 A0A1B0GV50 99 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 HAGHQ16775 308 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 ATG4DQ86TL0 474 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 HSD17B11Q8NBQ5 300 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FAM213BQ8TBF2 198 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FAM210BQ96KR6 192 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 FOXN4Q96NZ1 517 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 ABHD6Q9BV23 337 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SNHG12Q9BXW3 62 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 EMC9Q9Y3B6 208 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 R4GMQ9 66 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 SERINC4A6NH21 518 aa7.11□□□□□ -1.27
HMGXB4-202ENST00000418170 TMEM14DPA8MWL7 114 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms