RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 USP43Q70EL4 1123 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 MEPCEQ7L2J0 689 aaKnown RBP12.8□□□□□ -0.36
NUP50-204ENST00000417702 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 CNN2Q99439 309 aaKnown RBP12.8□□□□□ -0.36
NUP50-204ENST00000417702 MICU1Q9BPX6 476 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 ABCB9Q9NP78 766 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 RHBDD3Q9Y3P4 386 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 CUBNO60494 3623 aa12.8□□□□□ -0.36
NUP50-204ENST00000417702 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 C3orf80F5H4A9 247 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 PHYHO14832 338 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 NDUFA2O43678 99 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ZNF254O75437 659 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 BAG2O95816 211 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 FSHBP01225 129 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 EPHA2P29317 976 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 CD80P33681 288 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 PAX8Q06710 450 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 NXNL2Q5VZ03 156 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
NUP50-204ENST00000417702 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 OR1M1Q8NGA1 313 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 OR8B12Q8NGG6 310 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ZFAND2BQ8WV99 257 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 RAB40AQ8WXH6 277 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 CIB1Q99828 191 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ERVK-18Q9QC07 812 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 IKZF2Q9UKS7 526 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 ORC6Q9Y5N6 252 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 MPC1Q9Y5U8 109 aa12.79□□□□□ -0.36
NUP50-204ENST00000417702 IGHV2-70DA0A0C4DH43 119 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 TMEM269A0A1B0GVZ9 245 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 M0R129 80 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 PSMD9O00233 223 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 DCTDP32321 178 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 PSMB10P40306 273 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 NPY4RP50391 375 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 RIDAP52758 137 aaKnown RBP12.78□□□□□ -0.36
NUP50-204ENST00000417702 HILS1P60008 231 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 ROM1Q03395 351 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 ZNF829Q3KNS6 432 aaPredicted RBP12.78□□□□□ -0.36
NUP50-204ENST00000417702 AADACL4Q5VUY2 407 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 BCDIN3DQ7Z5W3 292 aaKnown RBP12.78□□□□□ -0.36
NUP50-204ENST00000417702 COMMD2Q86X83 199 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 GID4Q8IVV7 300 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 ZNF679Q8IYX0 411 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 PQLC1Q8N2U9 271 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 GALNT4Q8N4A0 578 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 SEMA6DQ8NFY4 1073 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 ITFG2Q969R8 447 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 OR8B4Q96RC9 309 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 IL4I1Q96RQ9 567 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 MNTQ99583 582 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 SLC6A7Q99884 636 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 C9orf16Q9BUW7 83 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 RTL8AQ9BWD3 113 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 NUP50Q9UKX7 468 aa12.78□□□□□ -0.36
NUP50-204ENST00000417702 A0A0U1RQV5 110 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 KIR2DS1A0A191URI9 304 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ZNF850A8MQ14 1090 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ANKRD65E5RJM6 399 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 TRIM77I1YAP6 450 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ADAM20O43506 726 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 CST4P01036 141 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ACKR3P25106 362 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 MAP2K3P46734 347 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ALDH3A2P51648 485 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 EFNB1P98172 346 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.37
NUP50-204ENST00000417702 PAX2Q02962 417 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 PRDX4Q13162 271 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 CD276Q5ZPR3 534 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ZNF322Q6U7Q0 402 aaPredicted RBP12.77□□□□□ -0.37
NUP50-204ENST00000417702 RBMS3Q6XE24 437 aaKnown RBP12.77□□□□□ -0.37
NUP50-204ENST00000417702 SLC35F2Q8IXU6 374 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 GCSAMQ8N6F7 178 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 C22orf15Q8WYQ4 148 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 PIGCQ92535 297 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 LYZL4Q96KX0 146 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 TECTBQ96PL2 329 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 HIST1H2AAQ96QV6 131 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 NUDT16L1Q9BRJ7 211 aaKnown RBP12.77□□□□□ -0.37
NUP50-204ENST00000417702 TTTY10Q9BZA0 68 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 RIBC2Q9H4K1 309 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 FAM206AQ9NX38 181 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 HAO2Q9NYQ3 351 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 USE1Q9NZ43 259 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 COPS3Q9UNS2 423 aa12.77□□□□□ -0.37
NUP50-204ENST00000417702 TMEM210A6NLX4 147 aa12.76□□□□□ -0.37
NUP50-204ENST00000417702 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
NUP50-204ENST00000417702 EI24O14681 340 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms