RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 ADA2Q9NZK5 511 aa8.2□□□□□ -1.1
MDC1-202ENST00000416571 SF3B6Q9Y3B4 125 aaKnown RBP8.2□□□□□ -1.1
MDC1-202ENST00000416571 TVP23AA6NH52 213 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 ANXA2P2A6NMY6 339 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 M0R1W7 72 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 NDUFAB1O14561 156 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 CDIPTO14735 213 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 IDH3BO43837 385 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 DIRAS1O95057 198 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SPARCP09486 303 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SLC2A1P11166 492 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 NCK1P16333 377 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 NDUFB7P17568 137 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 OTX1P32242 354 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 IFNGR2P38484 337 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SLC15A1P46059 708 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SMIM11AP58511 58 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 CSNK2BP67870 215 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 EMX1Q04741 257 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.19□□□□□ -1.1
MDC1-202ENST00000416571 SNCBQ16143 134 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 LRRC75BQ2VPJ9 315 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SLC35F1Q5T1Q4 408 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 STUMQ69YW2 141 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 DCXRQ7Z4W1 244 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 WDR86Q86TI4 376 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 ZDHHC21Q8IVQ6 265 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 C11orf53Q8IXP5 236 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 LYG1Q8N1E2 194 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 FTMTQ8N4E7 242 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 OR4F17Q8NGA8 305 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 OR2T4Q8NH00 348 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 C8orf46Q8TAG6 207 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 PPP1R35Q8TAP8 253 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 TNFRSF14Q92956 283 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 R3HDM4Q96D70 268 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SLAMF6Q96DU3 332 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SEH1LQ96EE3 360 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 MED30Q96HR3 178 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 OR4F4Q96R69 305 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 NKX3-1Q99801 234 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 HOPXQ9BPY8 73 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 PAPOLGQ9BWT3 736 aaKnown RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 DNTTIP1Q9H147 329 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SP140LQ9H930 580 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SNTG1Q9NSN8 517 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 AURKAIP1Q9NWT8 199 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 HAO2Q9NYQ3 351 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 NDUFAF4Q9P032 175 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SLC25A10Q9UBX3 287 aaPredicted RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 ZNF391Q9UJN7 358 aa8.19□□□□□ -1.1
MDC1-202ENST00000416571 SAMD4AQ9UPU9 718 aaKnown RBP8.19□□□□□ -1.1
MDC1-202ENST00000416571 ZNF878C9JN71 531 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 H0YAE9 185 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 NME4O00746 187 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 ANGPTL7O43827 346 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 PEX14O75381 377 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 FBXO24O75426 580 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 GMNNO75496 209 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 GADD45GO95257 159 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 ANXA2P07355 339 aaKnown RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 SELLP14151 372 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 ANOS1P23352 680 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 CFL1P23528 166 aaKnown RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 HSD11B1P28845 292 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 PYCR1P32322 319 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 TGM4P49221 684 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 SPIBQ01892 262 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 GFOD2Q3B7J2 385 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 VAX1Q5SQQ9 334 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 SLC16A9Q7RTY1 509 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 OR52L1Q8NGH7 329 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 OR5D13Q8NGL4 314 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 RP9Q8TA86 221 aaKnown RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 RORBQ92753 470 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 DUS3LQ96G46 650 aaKnown RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 REEP6Q96HR9 211 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 MICU1Q9BPX6 476 aa8.18□□□□□ -1.1
MDC1-202ENST00000416571 KCTD14Q9BQ13 255 aaPredicted RBP8.18□□□□□ -1.1
MDC1-202ENST00000416571 SLC22A2O15244 555 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 APOC1P02654 83 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 PAICSP22234 425 aaKnown RBP8.17□□□□□ -1.1
MDC1-202ENST00000416571 FMO3P31513 532 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 CX3CR1P49238 355 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 ENTPD1P49961 510 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 GRB2P62993 217 aaKnown RBP8.17□□□□□ -1.1
MDC1-202ENST00000416571 FAM3AP98173 230 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 IL5RAQ01344 420 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 AANATQ16613 207 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 DGUOKQ16854 277 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
MDC1-202ENST00000416571 ATPAF1Q5TC12 328 aaPredicted RBP8.17□□□□□ -1.1
MDC1-202ENST00000416571 KCTD8Q6ZWB6 473 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 FAM86B1Q8N7N1 296 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 CYB561A3Q8NBI2 242 aa8.17□□□□□ -1.1
MDC1-202ENST00000416571 PAPD5Q8NDF8 572 aaKnown RBP8.17□□□□□ -1.1
MDC1-202ENST00000416571 CSNK2A3Q8NEV1 391 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms