RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 PABPC1L2AQ5JQF8 200 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ANKRD16Q6P6B7 361 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 OR13C8Q8NGS7 320 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 DERL3Q96Q80 235 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF2Q9BSG1 426 aaPredicted RBP10.67□□□□□ -0.7
PTPRF-205ENST00000414879 POFUT1Q9H488 388 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 SMOC1Q9H4F8 434 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 SSUH2Q9Y2M2 353 aa10.67□□□□□ -0.7
PTPRF-205ENST00000414879 PTPRZ1P23471 2315 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 TMEM235A6NFC5 223 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 F8W036 122 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 HS3ST1O14792 307 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 TSPAN2O60636 221 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CT45A6P0DMU7 189 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CT45A5P0DMU8 189 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CT45A7P0DMV0 189 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ALDH3B1P43353 468 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 NKX2-1P43699 371 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CT45A1Q5HYN5 189 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 THSD4Q6ZMP0 1018 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CDC20BQ86Y33 519 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 SLC38A6Q8IZM9 456 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ZDHHC22Q8N966 263 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 OR5D13Q8NGL4 314 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CT45A3Q8NHU0 189 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 TCTEX1D2Q8WW35 142 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 MOGAT1Q96PD6 335 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 HEYLQ9NQ87 328 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 SLC23A1Q9UHI7 598 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF107Q9UII5 783 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 TRGV10A0A0A0MS01 117 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 HSPB6O14558 160 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CDC42EP2O14613 210 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CLDN1O95832 211 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 FAM157BP0CG42 384 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 SOX18P35713 384 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CD79BP40259 229 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 CLDN20P56880 219 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 MRPS34P82930 218 aaKnown RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ATPAF1Q5TC12 328 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 DMKNQ6E0U4 476 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 INO80CQ6PI98 192 aaPredicted RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 MAFIPQ8WZ33 124 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 SRRQ9GZT4 340 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 SPAG17Q6Q759 2223 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ANK1P16157 1881 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 C1QBP02746 253 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 FAHP16930 419 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ACP1P24666 158 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 FCN2Q15485 313 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 LRRC10Q5BKY1 277 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 XAF1Q6GPH4 301 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ELP2Q6IA86 826 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 OR2AK2Q8NG84 335 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 ADAT1Q9BUB4 502 aaKnown RBP10.66□□□□□ -0.7
PTPRF-205ENST00000414879 FLVCR1Q9Y5Y0 555 aa10.66□□□□□ -0.7
PTPRF-205ENST00000414879 IGHV1-45A0A0A0MS14 117 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 F6UZH7 168 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 GALR2O43603 387 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 ZFPL1O95159 310 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 TXNDC12O95881 172 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CTLA4P16410 223 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CDAP32320 146 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 FABP6P51161 128 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 DGCR2P98153 550 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CSRP2Q16527 193 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 TAF9Q16594 264 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 GALMQ96C23 342 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 GPX7Q96SL4 187 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 NUDT16L1Q9BRJ7 211 aaKnown RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 ZNF416Q9BWM5 594 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 PATJQ8NI35 1801 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 FFAR1O14842 300 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 ENSAO43768 121 aaKnown RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 TGM6O95932 706 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CRYBB2P43320 205 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 HNF4GQ14541 408 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 FAM58AQ8N1B3 248 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 OR8D4Q8NGM9 314 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 PTP4A1Q93096 173 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 GNPNAT1Q96EK6 184 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CNTNAP3Q9BZ76 1288 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 AUNIPQ9H7T9 357 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 RANGRFQ9HD47 186 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 TAS2R5Q9NYW4 299 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 KNTC1P50748 2209 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 EIF4EP06730 217 aaKnown RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 ACAA2P42765 397 aaKnown RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CCR6P51684 374 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 DVL3Q92997 716 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-205ENST00000414879 CROCCQ5TZA2 2017 aa10.65□□□□□ -0.7
PTPRF-205ENST00000414879 ANKRD33BA6NCL7 494 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 FABP7O15540 132 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 SNAPINO95295 136 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 SOX8P57073 446 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 GGTLC2Q14390 218 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 KISS1Q15726 138 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 SCCPDHQ8NBX0 429 aa10.65□□□□□ -0.71
PTPRF-205ENST00000414879 TERB2Q8NHR7 220 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms