RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 HTR1AP08908 422 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 CCL1P22362 96 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 AQP4P55087 323 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 CDH15P55291 814 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 PRSS12P56730 875 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 KCNJ8Q15842 424 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 TP53I3Q53FA7 332 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 TMEM244Q5VVB8 128 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 FDX2Q6P4F2 183 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 KRT74Q7RTS7 529 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 CATSPERDQ86XM0 798 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 RORBQ92753 470 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 FAM71F1Q96KD3 344 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-206ENST00000414829 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 TECTBQ96PL2 329 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 GAL3ST1Q99999 423 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 AMBNQ9NP70 447 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 ERVK13-1Q9NX77 482 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 DIMT1Q9UNQ2 313 aaKnown RBP12.38□□□□□ -0.43
LIMS1-206ENST00000414829 SLC22A13Q9Y226 551 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 WIPI2Q9Y4P8 454 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 NPTNQ9Y639 398 aa12.38□□□□□ -0.43
LIMS1-206ENST00000414829 ISPDA4D126 451 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 OR5B21A6NL26 309 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 A6NLC8 198 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 SYT7O43581 403 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 CD5LO43866 347 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 PNPP00491 289 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 PCMT1P22061 227 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 CCR9P51686 369 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 GBX2P52951 348 aaPredicted RBP12.37□□□□□ -0.43
LIMS1-206ENST00000414829 BTG1P62324 171 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 TMEM155Q4W5P6 130 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 CYB5R2Q6BCY4 276 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 IZUMO2Q6UXV1 221 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 MOGAT3Q86VF5 341 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 FBLIM1Q8WUP2 373 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 NRG4Q8WWG1 115 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 TMEM80Q96HE8 168 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 LYZL4Q96KX0 146 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 ANKRD60Q9BZ19 345 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 Q9H521 79 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 CAB39Q9Y376 341 aaPredicted RBP12.37□□□□□ -0.43
LIMS1-206ENST00000414829 RHBDD3Q9Y3P4 386 aa12.37□□□□□ -0.43
LIMS1-206ENST00000414829 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 TMEM212A6NML5 194 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 H0YL77 283 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 TMEM178BH3BS89 294 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 J3QLW9 94 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 MAGEB4O15481 346 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 GATBO75879 557 aaKnown RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 GNAO1P09471 354 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 ZNF19P17023 458 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 ANOS1P23352 680 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 ACKR3P25106 362 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 VHLP40337 213 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 MDH2P40926 338 aaKnown RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 OR12D2P58182 307 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 GNG3P63215 75 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 PRDX4Q13162 271 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 MAB21L1Q13394 359 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 SMN1Q16637 294 aaKnown RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 WDR38Q5JTN6 314 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 CLVS2Q5SYC1 327 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 C6orf52Q5T4I8 152 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 Q6ZSR3 168 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 OR2G2Q8NGZ5 317 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 ITPKCQ96DU7 683 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 PELI1Q96FA3 418 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 PLCXD1Q9NUJ7 323 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 SCN3BQ9NY72 215 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 PIGLQ9Y2B2 252 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 MYRFQ9Y2G1 1151 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 RRP15Q9Y3B9 282 aaKnown RBP12.36□□□□□ -0.43
LIMS1-206ENST00000414829 CACNG2Q9Y698 323 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 V9GYS6 101 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 HIVEP1P15822 2718 aa12.36□□□□□ -0.43
LIMS1-206ENST00000414829 LOC107986453A0A1B0GWG9 222 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 B4DSR2 109 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 RRP9O43818 475 aaKnown RBP12.35□□□□□ -0.43
LIMS1-206ENST00000414829 SERPINA3P01011 423 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 ISG15P05161 165 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 TGM4P49221 684 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 TAS2R43P59537 309 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 MVKQ03426 396 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 CEACAM21Q3KPI0 293 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 CCDC58Q4VC31 144 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 PLCXD3Q63HM9 321 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 LHFPL3Q86UP9 236 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 STX19Q8N4C7 294 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 OR52N1Q8NH53 320 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 CLDND2Q8NHS1 167 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 PP6455Q8WZ26 134 aa12.35□□□□□ -0.43
LIMS1-206ENST00000414829 OR5P3Q8WZ94 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms