RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZIC1Q15915 447 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF528Q3MIS6 628 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 UBE2NLQ5JXB2 153 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM225Q6GV28 225 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 TNFAIP8L2Q6P589 184 aaPredicted RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 FIGNL1Q6PIW4 674 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 LRRN1Q6UXK5 716 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MRPL21Q7Z2W9 205 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SMAP2Q8WU79 429 aaPredicted RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 THEM6Q8WUY1 208 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SMIM10Q96HG1 83 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KLHDC3Q9BQ90 382 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 NDC1Q9BTX1 674 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ALG8Q9BVK2 526 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 C1QTNF5Q9BXJ0 243 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 ARRDC1-AS1Q9H2J1 176 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 KLHL31Q9H511 634 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 DDX31Q9H8H2 851 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 EXOSC3Q9NQT5 275 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 CA10Q9NS85 328 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 STARD5Q9NSY2 213 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 RASL12Q9NYN1 266 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 P2RX2Q9UBL9 471 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 OPN4Q9UHM6 478 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 MRTO4Q9UKD2 239 aaKnown RBP8.33□□□□□ -1.08
SNHG3-201ENST00000413987 FBXO4Q9UKT5 387 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 LRP12Q9Y561 859 aa8.33□□□□□ -1.08
SNHG3-201ENST00000413987 SCN3AQ9NY46 2000 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 KMT2EQ8IZD2 1858 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 UNC13CQ8NB66 2214 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 FXYD6-FXYD2A0A087WZ82 144 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 DISC1C4P0D8 188 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 F5H5P2 479 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 NBR2O15453 112 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 KRT33AO76009 404 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 SIX6O95475 246 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 RLN2P04090 185 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 ATP1B1P05026 303 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 IL3P08700 152 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 AQP2P41181 271 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 MAP3K8P41279 467 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 PGDP52209 483 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 STX4Q12846 297 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 GUK1Q16774 197 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 SLC25A35Q3KQZ1 300 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 OR2A2Q6IF42 318 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 CCDC144NLQ6NUI1 221 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 ARL9Q6T311 187 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 ZNF562Q6V9R5 426 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 IL17RELQ6ZVW7 336 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 C6orf120Q7Z4R8 191 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 SKA3Q8IX90 412 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 PIGXQ8TBF5 258 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 NEK7Q8TDX7 302 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 SFT2D1Q8WV19 159 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 WDR34Q96EX3 536 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 TSNAXQ99598 290 aaKnown RBP8.32□□□□□ -1.08
SNHG3-201ENST00000413987 EFCAB11Q9BUY7 163 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 RAB11FIP5Q9BXF6 653 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 WWTR1Q9GZV5 400 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 FXYD6Q9H0Q3 95 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 METTL9Q9H1A3 318 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 ISG20L2Q9H9L3 353 aaKnown RBP8.32□□□□□ -1.08
SNHG3-201ENST00000413987 CTPS2Q9NRF8 586 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
SNHG3-201ENST00000413987 NUP214P35658 2090 aaPredicted RBP8.32□□□□□ -1.08
SNHG3-201ENST00000413987 ZFHX4Q86UP3 3567 aa8.32□□□□□ -1.08
SNHG3-201ENST00000413987 A0A0D9SG52 128 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 DAPL1A0PJW8 107 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 TMEM82A0PJX8 343 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 LINC00587B1AMM8 73 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SIVA1O15304 175 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 FLRT2O43155 660 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 ARL6IP5O75915 188 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 EPXP11678 715 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 ST6GAL1P15907 406 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CRABP1P29762 137 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 AGTR1P30556 359 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SORDQ00796 357 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 PGGHGQ32M88 737 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 H3F3CQ6NXT2 135 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 APOOLQ6UXV4 268 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 LINGO2Q7L985 606 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 DMBX1Q8NFW5 382 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 OR2D3Q8NGH3 330 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 OR1L4Q8NGR5 311 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 NUBPLQ8TB37 319 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 FCAMRQ8WWV6 532 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 S100PBPQ96BU1 408 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 TGM7Q96PF1 710 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 AIF1LQ9BQI0 150 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CACYBPQ9HB71 228 aaKnown RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CHMP1AQ9HD42 196 aaPredicted RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 FAM60AQ9NP50 221 aa8.31□□□□□ -1.08
SNHG3-201ENST00000413987 SIRT4Q9Y6E7 314 aaPredicted RBP8.31□□□□□ -1.08
SNHG3-201ENST00000413987 CFAP47Q6ZTR5 3102 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms