RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 LRCH1Q9Y2L9 728 aa12.39□□□□□ -0.43
LIMS4-201ENST00000413601 POLR3KQ9Y2Y1 108 aaPredicted RBP12.39□□□□□ -0.43
LIMS4-201ENST00000413601 PPIAL4CA0A0B4J2A2 164 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 A0A0U1RQV5 110 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ACOD1A6NK06 481 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF850A8MQ14 1090 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF670-ZNF695F2Z2N8 137 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 PHYHO14832 338 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 APOL3O95236 402 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 HTR1FP30939 366 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 DCTDP32321 178 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 CD80P33681 288 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ALDH3A2P51648 485 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 CDC42P60953 191 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 MFGE8Q08431 387 aaPredicted RBP12.38□□□□□ -0.43
LIMS4-201ENST00000413601 PRDX4Q13162 271 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 SNCBQ16143 134 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 DCDC5Q6ZRR9 648 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 C11orf53Q8IXP5 236 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 FTMTQ8N4E7 242 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 CBR4Q8N4T8 237 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 OR1M1Q8NGA1 313 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 OR8B3Q8NGG8 313 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 FAM81AQ8TBF8 368 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 TMEM158Q8WZ71 300 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 PIGCQ92535 297 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 EME1Q96AY2 570 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ITPKCQ96DU7 683 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 OR8B2Q96RD0 313 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 MNTQ99583 582 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 TBX5Q99593 518 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 S100A14Q9HCY8 104 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 OPN4Q9UHM6 478 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF391Q9UJN7 358 aa12.38□□□□□ -0.43
LIMS4-201ENST00000413601 ANXA2P2A6NMY6 339 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 LGALS8O00214 317 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 SRSF10O75494 262 aaKnown RBP12.37□□□□□ -0.43
LIMS4-201ENST00000413601 CST4P01036 141 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 CPT2P23786 658 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 MAP2K3P46734 347 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 GNB2P62879 340 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 CSNK2BP67870 215 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF154Q13106 437 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF829Q3KNS6 432 aaPredicted RBP12.37□□□□□ -0.43
LIMS4-201ENST00000413601 PLEKHG7Q6ZR37 379 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 NLRC3Q7RTR2 1065 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 SSX6Q7RTT6 188 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 C1QL2Q7Z5L3 287 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 COMMD2Q86X83 199 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 GCSAMQ8N6F7 178 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 OR51E1Q8TCB6 317 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 HRASLS5Q96KN8 279 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 IMPAD1Q9NX62 359 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
LIMS4-201ENST00000413601 OR5V1Q9UGF6 321 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 NUFIP1Q9UHK0 495 aaKnown RBP12.37□□□□□ -0.43
LIMS4-201ENST00000413601 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
LIMS4-201ENST00000413601 GTF2A1LQ9UNN4 478 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 INSIG2Q9Y5U4 225 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 MPC1Q9Y5U8 109 aa12.37□□□□□ -0.43
LIMS4-201ENST00000413601 A0A1W2PQL4 384 aaPredicted RBP12.36□□□□□ -0.43
LIMS4-201ENST00000413601 LOC110117498-PIK3R3F6TDL0 507 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 TCF21O43680 179 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 LHBP01229 141 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 TTRP02766 147 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF12P17014 697 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 EGR1P18146 543 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 ATP6V1E1P36543 226 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 PITPNBP48739 271 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 IL5RAQ01344 420 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 PAX2Q02962 417 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 EGR3Q06889 387 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 POU4F2Q12837 409 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 KRTAP24-1Q3LI83 254 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 WDR82Q6UXN9 313 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 GALNT4Q8N4A0 578 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 NANPQ8TBE9 248 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 OR5P3Q8WZ94 311 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 RFKQ969G6 155 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 FAM71F1Q96KD3 344 aaPredicted RBP12.36□□□□□ -0.43
LIMS4-201ENST00000413601 MBOAT4Q96T53 435 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 SLC29A1Q99808 456 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 MICU1Q9BPX6 476 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 RTL8AQ9BWD3 113 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 GPR84Q9NQS5 396 aa12.36□□□□□ -0.43
LIMS4-201ENST00000413601 ATRQ13535 2644 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 IGHV3OR15-7A0A075B7D8 119 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 TRAV38-1A0A0B4J264 116 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 OOEPA6NGQ2 149 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 E9PQ18 207 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 CDIPTO14735 213 aa12.35□□□□□ -0.43
LIMS4-201ENST00000413601 RGS9O75916 674 aaPredicted RBP12.35□□□□□ -0.43
LIMS4-201ENST00000413601 RPP14O95059 124 aaKnown RBP12.35□□□□□ -0.43
LIMS4-201ENST00000413601 IGLV3-1P01715 115 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms