RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SEMG1P04279 462 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ARSBP15848 533 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 BMP5P22003 454 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 CDKN2AP42771 156 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MTCP1P56278 107 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF718Q3SXZ3 478 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SCGB2B2Q4G0G5 96 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 VWA1Q6PCB0 445 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 WFDC8Q8IUA0 241 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 CPEB3Q8NE35 698 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR8D4Q8NGM9 314 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 CMTM3Q96MX0 182 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 PSMG3Q9BT73 122 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SLC25A18Q9H1K4 315 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SYNPO2LQ9H987 977 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 TAS2R16Q9NYV7 291 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MGAT4CQ9UBM8 478 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 CALCBP10092 127 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 PCMT1P22061 227 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 DNASE1P24855 282 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 TNFSF10P50591 281 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 LSM6P62312 80 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 RAB1AP62820 205 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 LRRC37A5PQ49AS3 106 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 COMMD7Q86VX2 200 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR1F12Q8NHA8 337 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 APOBEC3DQ96AK3 386 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ZC3HAV1LQ96H79 300 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 METTL9Q9H1A3 318 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 KCNIP1Q9NZI2 227 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 TEX13DA0A0J9YY54 714 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 UBBP0CG47 229 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 AKAIN1P0CW23 69 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ASAH1Q13510 395 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 TEX261Q6UWH6 196 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 DRAM2Q6UX65 266 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ASCL4Q6XD76 172 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 NCCRP1Q6ZVX7 275 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 SLC22A24Q8N4F4 322 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF441Q8N8Z8 693 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 OR56B4Q8NH76 319 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 KLK13Q9UKR3 277 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 MRPS18CQ9Y3D5 142 aaKnown RBP7.58□□□□□ -1.2
SYNE1-211ENST00000413186 U3KQ87 197 aa7.58□□□□□ -1.2
SYNE1-211ENST00000413186 C5orf49A4QMS7 147 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ACOD1A6NK06 481 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF780AO75290 641 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SLC25A6P12236 298 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 TAS2R31P59538 309 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 HERV-K104P61576 105 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 C1orf185Q5T7R7 199 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 LAX1Q8IWV1 398 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SPACA3Q8IXA5 215 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SYNPRQ8TBG9 265 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SIGLEC11Q96RL6 698 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ZFP57Q9NU63 452 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ADAM10O14672 748 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ASAH2BP0C7U1 165 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 DDOSTP39656 456 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 BTG1P62324 171 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 CDK5R1Q15078 307 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 OR51T1Q8NGJ9 327 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 DYRK2Q92630 601 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SMIM19Q96E16 107 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ACKR4Q9NPB9 350 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 TRAV18A0A075B6X5 111 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 LOC107986453A0A1B0GWG9 222 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 PTP4A3O75365 173 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SLC2A1P11166 492 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 MPGP29372 298 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 CYCSP99999 105 aaKnown RBP7.57□□□□□ -1.2
SYNE1-211ENST00000413186 FMODQ06828 376 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 TMED4Q7Z7H5 227 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 TUSC5Q8IXB3 177 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 WNT2BQ93097 391 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SGK3Q96BR1 496 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 FGGYQ96C11 551 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 WDFY2Q96P53 400 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 PRRT1Q99946 306 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 VRK1Q99986 396 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-211ENST00000413186 KCNJ16Q9NPI9 418 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ZNF256Q9Y2P7 627 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-211ENST00000413186 AMDHD2Q9Y303 409 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 ATP23Q9Y6H3 246 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SDK2Q58EX2 2172 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 MASP2O00187 686 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 CTLA4P16410 223 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 NPBWR1P48145 328 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 TAS2R60P59551 318 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 RAB31Q13636 194 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 CHRFAM7AQ494W8 412 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 KCTD9Q7L273 389 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 FAM71CQ8NEG0 241 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 OR6M1Q8NGM8 313 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 SNAPC3Q92966 411 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 BOD1Q96IK1 185 aa7.57□□□□□ -1.2
SYNE1-211ENST00000413186 PBDC1Q9BVG4 233 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms