RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SEMA6DQ8NFY4 1073 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 RTN4IP1Q8WWV3 396 aaPredicted RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 BORCS8Q96FH0 119 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SAMD10Q9BYL1 202 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 PBOV1Q9GZY1 135 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 VDAC3Q9Y277 283 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 MRPS18BQ9Y676 258 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SERPINE2P07093 398 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SEC11BP0C7V7 166 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 NOVA1P51513 510 aaKnown RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF133P52736 654 aaPredicted RBP12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 IQCJQ1A5X6 159 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 NECAP1Q8NC96 275 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 SNX22Q96L94 193 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 METTL9Q9H1A3 318 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 LAMP3Q9UQV4 416 aa12.44□□□□□ -0.42
CLTCL1-201ENST00000412649 GAPDHP04406 335 aaKnown RBP12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 OR5H8P0DN80 308 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 FAM3AP98173 230 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 MESTQ5EB52 335 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 ARHGAP5-AS1Q96IT6 56 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 HIST1H2AAQ96QV6 131 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 METTL7AQ9H8H3 244 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 FBRSQ9HAH7 460 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 V9GYS6 101 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 M0R143 59 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF43P17038 809 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 DLK1P80370 383 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 AGBL4Q5VU57 503 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC38A9Q8NBW4 561 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 TSLPQ969D9 159 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 FGF22Q9HCT0 170 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 FTCDNL1E5RQL4 147 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 CT62P0C5K7 136 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 HHEXQ03014 270 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 SGCBQ16585 318 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 GPR87Q9BY21 358 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 GPR61Q9BZJ8 451 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 PLXNB2O15031 1838 aa12.43□□□□□ -0.42
CLTCL1-201ENST00000412649 A0A1W2PPC1 479 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 PRKNO60260 465 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ACAA2P42765 397 aaKnown RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 BIDP55957 195 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 TAS2R60P59551 318 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 NSDHLQ15738 373 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 THAP3Q8WTV1 239 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 OR5B2Q96R09 309 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SPSB2Q99619 263 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SIRT7Q9NRC8 400 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 IGHG1P01857 330 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 KLK3P07288 261 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SNCAP37840 140 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ASCL1P50553 236 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 MTCP1P56278 107 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 MALLQ13021 153 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SP6Q3SY56 376 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 PTX4Q96A99 478 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 GFI1Q99684 422 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC26A1Q9H2B4 701 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 MRPL22Q9NWU5 206 aaKnown RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 A0A0U1RQK1 487 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 HLA-DRB3P79483 266 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 C1orf61Q13536 156 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF141Q15928 474 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF542PQ5EBM4 170 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 DDAH2O95865 285 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ERGP11308 486 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF25P17030 456 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF385CQ66K41 422 aaPredicted RBP12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 LCN15Q6UWW0 184 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 COX14Q96I36 57 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 BTF3L4Q96K17 158 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 GPR84Q9NQS5 396 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC39A9Q9NUM3 307 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 TINAGQ9UJW2 476 aa12.42□□□□□ -0.42
CLTCL1-201ENST00000412649 ZIC2O95409 532 aaPredicted RBP12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 ACKR3P25106 362 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 MR1Q95460 341 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 PIGTQ969N2 578 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 SLC2A8Q9NY64 477 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 LIPGQ9Y5X9 500 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 ALPK2Q86TB3 2170 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 SSSCA1O60232 199 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 ADCYAP1P18509 176 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 GABREP78334 506 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 DOK3Q7L591 496 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 HOGA1Q86XE5 327 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 GPR119Q8TDV5 335 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 SMIM8Q96KF7 97 aa12.41□□□□□ -0.42
CLTCL1-201ENST00000412649 NOL4LQ96MY1 436 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms