RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TMEM177Q53S58 311 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 IGSF11Q5DX21 431 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 BEX5Q5H9J7 111 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 C3orf33Q6P1S2 294 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 TMEM91Q6ZNR0 172 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 TMPPEQ6ZT21 453 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 RASSF6Q6ZTQ3 369 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 NUFIP2Q7Z417 695 aaKnown RBP4.62□□□□□ -1.67
LINC00342-201ENST00000412393 STX12Q86Y82 276 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 TUSC5Q8IXB3 177 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 OR6V1Q8N148 313 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SLC43A2Q8N370 569 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 CPEB3Q8NE35 698 aaKnown RBP4.62□□□□□ -1.67
LINC00342-201ENST00000412393 STEAP2Q8NFT2 490 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 OR9Q2Q8NGE9 314 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 ZNF563Q8TA94 476 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 FANK1Q8TC84 345 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 C15orf40Q8WUR7 153 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 CNOT9Q92600 299 aaKnown RBP4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SLC38A2Q96QD8 506 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 GAL3ST1Q99999 423 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SEC22CQ9BRL7 303 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 WACQ9BTA9 647 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 CACNG6Q9BXT2 260 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 BEX2Q9BXY8 128 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 ABCG5Q9H222 651 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SLC38A1Q9H2H9 487 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 UBTD1Q9HAC8 227 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 PCDHB16Q9NRJ7 776 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 BEX4Q9NWD9 120 aaPredicted RBP4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SDHAF2Q9NX18 166 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 RDH8Q9NYR8 311 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 TAS2R16Q9NYV7 291 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 KLHL9Q9P2J3 617 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 KLHL13Q9P2N7 655 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 COMMD3Q9UBI1 195 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 GPR52Q9Y2T5 361 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SPIN1Q9Y657 262 aaPredicted RBP4.62□□□□□ -1.67
LINC00342-201ENST00000412393 SESN1Q9Y6P5 492 aa4.62□□□□□ -1.67
LINC00342-201ENST00000412393 TRBV4-1A0A0J9YWV2 114 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CIB4A0PJX0 185 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 MCRIP1C9JLW8 97 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 M0R233 179 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SULT2B1O00204 365 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 GABRPO00591 440 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SMAD9O15198 467 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 TLX2O43763 284 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CYTIPO60759 359 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 DBIP07108 87 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CHRM4P08173 479 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 MELTFP08582 738 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 NMBP08949 121 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 NR2F1P10589 423 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 ETFAP13804 333 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CXCL3P19876 107 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 NFYAP23511 347 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 AZGP1P25311 298 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 LOXP28300 417 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 HTR1FP30939 366 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 APOBEC1P41238 236 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SLC1A3P43003 542 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 OR3A2P47893 321 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 INPP1P49441 399 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 DIO1P49895 249 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 RPS25P62851 125 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CSNK2A1P68400 391 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 NKX6-1P78426 367 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SRSF4Q08170 494 aaKnown RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 TSPAN31Q12999 210 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 KLF9Q13886 244 aaPredicted RBP4.61□□□□□ -1.67
LINC00342-201ENST00000412393 IL18Q14116 193 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 GINS1Q14691 196 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 OPCMLQ14982 345 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SNAPC1Q16533 368 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 ACKR1Q16570 336 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 Q3ZCU0 254 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 ACSM5Q6NUN0 579 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SLC27A4Q6P1M0 643 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 UQCC3Q6UW78 93 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 PGAP1Q75T13 922 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 GRINAQ7Z429 371 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 ZER1Q7Z7L7 766 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 GABRG1Q8N1C3 465 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 UBE2J2Q8N2K1 259 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 TCEANCQ8N8B7 351 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SYT14Q8NB59 555 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 CLRN3Q8NCR9 226 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 WFDC11Q8NEX6 87 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 GPR32P1Q8NGA4 272 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 OR6M1Q8NGM8 313 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 OR8D4Q8NGM9 314 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 TEX47Q8TBZ9 253 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 SLC7A13Q8TCU3 470 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 PMM1Q92871 262 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 MAL2Q969L2 176 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 YIPF5Q969M3 257 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 PIGTQ969N2 578 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 S100PBPQ96BU1 408 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 ARL5BQ96KC2 179 aa4.61□□□□□ -1.67
LINC00342-201ENST00000412393 LRR1Q96L50 414 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 432.8 ms