RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ATP6V1B1P15313 513 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 CCL1P22362 96 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 KIR3DL2P43630 455 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 AVPI1Q5T686 147 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 PRAMEF6Q5VXH4 476 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 FAM220AQ7Z4H9 259 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 EGFL6Q8IUX8 553 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 SYS1Q8N2H4 156 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 SPERTQ8NA61 448 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 ZNF420Q8TAQ5 688 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-203ENST00000409783 FAM71F1Q96KD3 344 aaPredicted RBP18.86■□□□□ 0.61
PTCD3-203ENST00000409783 C4orf36Q96KX1 117 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 VCX3BQ9H321 246 aa18.86■□□□□ 0.61
PTCD3-203ENST00000409783 ISG20L2Q9H9L3 353 aaKnown RBP18.86■□□□□ 0.61
PTCD3-203ENST00000409783 J3QLW9 94 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 P2RY10O00398 339 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 ZNF19P17023 458 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 IL2RGP31785 369 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 MAP2K3P46734 347 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 NANOS3P60323 173 aaKnown RBP18.85■□□□□ 0.61
PTCD3-203ENST00000409783 ACTA2P62736 377 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 ACTG2P63267 376 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 MPPED2Q15777 294 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 SNCBQ16143 134 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 ZNF181Q2M3W8 571 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 IZUMO2Q6UXV1 221 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 WDR86Q86TI4 376 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 MOGAT3Q86VF5 341 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 OR2G2Q8NGZ5 317 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 GGHQ92820 318 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 ITPKCQ96DU7 683 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 PAPOLGQ9BWT3 736 aaKnown RBP18.85■□□□□ 0.61
PTCD3-203ENST00000409783 FGF23Q9GZV9 251 aaPredicted RBP18.85■□□□□ 0.61
PTCD3-203ENST00000409783 PLCXD1Q9NUJ7 323 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 V9GYS6 101 aa18.85■□□□□ 0.61
PTCD3-203ENST00000409783 TMEM178BH3BS89 294 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 XPNPEP2O43895 674 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 DHRS3O75911 302 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 IGHV4-31P0DP07 118 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 DCKP27707 260 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 ETV1P50549 477 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 CHN2P52757 468 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 MVKQ03426 396 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 SLC3A1Q07837 685 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 PRDX4Q13162 271 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 CLEC9AQ6UXN8 241 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 SEMA6DQ8NFY4 1073 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 OR14K1Q8NGZ2 314 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 CLDND2Q8NHS1 167 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 Q8TCH9 128 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 ERGIC1Q969X5 290 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 FRRS1LQ9P0K9 344 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 DIMT1Q9UNQ2 313 aaKnown RBP18.84■□□□□ 0.61
PTCD3-203ENST00000409783 MPC1Q9Y5U8 109 aa18.84■□□□□ 0.61
PTCD3-203ENST00000409783 ZNF816-ZNF321PA0A0X1KG74 233 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 IRGMA1A4Y4 181 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 ZNF850A8MQ14 1090 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 IFNL4K9M1U5 179 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 IGHV2-70P01814 119 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 HEXAP06865 529 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 LMO4P61968 165 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 ZBTB37Q5TC79 503 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 COMMD2Q86X83 199 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 FTMTQ8N4E7 242 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 HPSE2Q8WWQ2 592 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 PIGCQ92535 297 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 RAB1CQ92928 201 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 MRPL48Q96GC5 212 aaKnown RBP18.83■□□□□ 0.6
PTCD3-203ENST00000409783 PSORS1C1Q9UIG5 152 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 NPTNQ9Y639 398 aa18.83■□□□□ 0.6
PTCD3-203ENST00000409783 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.83■□□□□ 0.62e-7■■■■□ 24.4
PTCD3-203ENST00000409783 MALRD1Q5VYJ5 2156 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-203ENST00000409783 E9PI62 339 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 MTRF1O75570 445 aaKnown RBP18.82■□□□□ 0.6
PTCD3-203ENST00000409783 PIPP12273 146 aaPredicted RBP18.82■□□□□ 0.6
PTCD3-203ENST00000409783 FAHP16930 419 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 MYF6P23409 242 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 GNALP38405 381 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 CCR9P51686 369 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 RIPPLY1Q0D2K3 151 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 ODF4Q2M2E3 257 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 DOK3Q7L591 496 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 C11orf53Q8IXP5 236 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 OR5P3Q8WZ94 311 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 HPS1Q92902 700 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 TIMD4Q96H15 378 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 C1orf159Q96HA4 380 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 ANKRD60Q9BZ19 345 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 NARFLQ9H6Q4 476 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 UFSP2Q9NUQ7 469 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 FKBP14Q9NWM8 211 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 C14orf119Q9NWQ9 140 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 PIGLQ9Y2B2 252 aa18.82■□□□□ 0.6
PTCD3-203ENST00000409783 DHRS7CA6NNS2 312 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 CD5LO43866 347 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 CYB5R3P00387 301 aaPredicted RBP18.81■□□□□ 0.6
PTCD3-203ENST00000409783 HTR1AP08908 422 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 ST3GAL4Q11206 333 aa18.81■□□□□ 0.6
PTCD3-203ENST00000409783 C6orf141Q5SZD1 244 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms