RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 H2AFB2P0C5Z0 115 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 TDGF1P13385 188 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 ZNF12P17014 697 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 NPY4RP50391 375 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 UBE2MP61081 183 aaKnown RBP10.02□□□□□ -0.81
SNX13-202ENST00000409604 BAMBIQ13145 260 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 ELMOD3Q96FG2 381 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 AUNIPQ9H7T9 357 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 STARD10Q9Y365 291 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 SPEGQ15772 3267 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 PSG4Q00888 419 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 FAM189A2Q15884 450 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 ZNF385CQ66K41 422 aaPredicted RBP10.02□□□□□ -0.81
SNX13-202ENST00000409604 C17orf78Q8N4C9 275 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 APOBEC3DQ96AK3 386 aaPredicted RBP10.02□□□□□ -0.81
SNX13-202ENST00000409604 UBTD1Q9HAC8 227 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 KLK11Q9UBX7 282 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 STEAP1Q9UHE8 339 aa10.02□□□□□ -0.81
SNX13-202ENST00000409604 ZNF230Q9UIE0 474 aaPredicted RBP10.02□□□□□ -0.81
SNX13-202ENST00000409604 TRAV8-7A0A075B6U6 113 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 LOC102723996A0A087X1L8 192 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 A0A1B0GV50 99 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 IFITM5A6NNB3 132 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 CDIPTO14735 213 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 EIF4EP06730 217 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 MTNR1BP49286 362 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 UNQ6494/PRO21346Q6UXR6 183 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 MRGPRGQ86SM5 289 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 ZDHHC23Q8IYP9 409 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 CMTM4Q8IZR5 234 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR4S1Q8NGB4 309 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR6F1Q8NGZ6 308 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR52I2Q8NH67 350 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR56B4Q8NH76 319 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 TMEM38BQ9NVV0 291 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 ITGB1BP2Q9UKP3 347 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 C16orf97H3BN30 126 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 ENSAO43768 121 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 PPP1CBP62140 327 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 IGFBP7Q16270 282 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 CTF1Q16619 201 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 ZNF808Q8N4W9 903 aaPredicted RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR6M1Q8NGM8 313 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR11L1Q8NGX0 322 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 SNRNP40Q96DI7 357 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 ADAT1Q9BUB4 502 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 TMEM100Q9NV29 134 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 A0A1W2PNU3 283 aaPredicted RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 MPGP29372 298 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 OR3A4PP47883 348 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 PPA1Q15181 289 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 STEAP3Q658P3 488 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 TMEM108Q6UXF1 575 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 TPRA1Q86W33 373 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 RNF128Q8TEB7 428 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 TRMT61AQ96FX7 289 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 SEC22AQ96IW7 307 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 SOX7Q9BT81 388 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 PTDSS2Q9BVG9 487 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 ETAA1Q9NY74 926 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 DNAH14Q0VDD8 3507 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 A0A0A6YYH2 397 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 A6NJ64 397 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 IFNA21P01568 189 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 SEMG1P04279 462 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 SNRPD2P62316 118 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 RAB35Q15286 201 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 RNFT1Q5M7Z0 435 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 GDPD3Q7L5L3 318 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 ZCCHC24Q8N2G6 241 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 SLC25A40Q8TBP6 338 aa10.01□□□□□ -0.81
SNX13-202ENST00000409604 MRPL22Q9NWU5 206 aaKnown RBP10.01□□□□□ -0.81
SNX13-202ENST00000409604 MYO9AB2RTY4 2548 aa10□□□□□ -0.81
SNX13-202ENST00000409604 A0A1W2PP11 408 aa10□□□□□ -0.81
SNX13-202ENST00000409604 BOLA2-SMG1P6H3BVE0 249 aa10□□□□□ -0.81
SNX13-202ENST00000409604 MGMTP16455 207 aa10□□□□□ -0.81
SNX13-202ENST00000409604 NBL1P41271 181 aa10□□□□□ -0.81
SNX13-202ENST00000409604 ACTBP60709 375 aa10□□□□□ -0.81
SNX13-202ENST00000409604 ACTG1P63261 375 aa10□□□□□ -0.81
SNX13-202ENST00000409604 PLGLAQ15195 96 aa10□□□□□ -0.81
SNX13-202ENST00000409604 KISS1Q15726 138 aa10□□□□□ -0.81
SNX13-202ENST00000409604 OR52W1Q6IF63 320 aa10□□□□□ -0.81
SNX13-202ENST00000409604 FBXW12Q6X9E4 464 aa10□□□□□ -0.81
SNX13-202ENST00000409604 LRRTM1Q86UE6 522 aa10□□□□□ -0.81
SNX13-202ENST00000409604 SIAH3Q8IW03 269 aa10□□□□□ -0.81
SNX13-202ENST00000409604 SLC25A46Q96AG3 418 aa10□□□□□ -0.81
SNX13-202ENST00000409604 OR2H1Q9GZK4 316 aa10□□□□□ -0.81
SNX13-202ENST00000409604 C12orf10Q9HB07 376 aa10□□□□□ -0.81
SNX13-202ENST00000409604 GFOD1Q9NXC2 390 aa10□□□□□ -0.81
SNX13-202ENST00000409604 QPCTLQ9NXS2 382 aa10□□□□□ -0.81
SNX13-202ENST00000409604 ABRACLQ9P1F3 81 aa10□□□□□ -0.81
SNX13-202ENST00000409604 TAAR3PQ9P1P4 343 aa10□□□□□ -0.81
SNX13-202ENST00000409604 MGAT4CQ9UBM8 478 aa10□□□□□ -0.81
SNX13-202ENST00000409604 B8ZZF3 427 aa10□□□□□ -0.81
SNX13-202ENST00000409604 ATP6V1G2-DDX39BF2Z307 99 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms