RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 UNQ9370/PRO34162Q6UXP9 181 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CSNK2A3Q8NEV1 391 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PHYHIPLQ96FC7 376 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 C4orf45Q96LM5 186 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 LPAR4Q99677 370 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 KLHDC3Q9BQ90 382 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 VSX1Q9NZR4 365 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 WASF3Q9UPY6 502 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 A0A1W2PR77 199 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 CYB5BO43169 146 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 FBP1P09467 338 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 PRF1P14222 555 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF823P16415 610 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 GUK1Q16774 197 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 MICBQ29980 383 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 SOHLH1Q5JUK2 328 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 GUSBP11Q6P575 273 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 TMEM182Q6ZP80 229 aaPredicted RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 LANCL3Q6ZV70 420 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 NELFAQ9H3P2 528 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 Q9N2J8 555 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 DNAJB12Q9NXW2 375 aaKnown RBP11.54□□□□□ -0.56
PTPRN-202ENST00000409251 EHFQ9NZC4 300 aa11.54□□□□□ -0.56
PTPRN-202ENST00000409251 FRYQ5TBA9 3013 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 LOC101059948A0A1B0GTJ6 334 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 LOC107986453A0A1B0GWG9 222 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 MASP2O00187 686 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF749O43361 778 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 BRINP1O60477 761 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 TBX19O60806 448 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 CRTAPO75718 401 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 THBS1P07996 1170 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 KLK2P20151 261 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 RBMXP38159 391 aaKnown RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 AFF3P51826 1226 aaKnown RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 CFHR1Q03591 330 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 PRICKLE4Q2TBC4 344 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 TCEAL6Q6IPX3 200 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ADGRE4PQ86SQ3 457 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 SKA3Q8IX90 412 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 OR5T1Q8NG75 326 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 C16orf52Q8NHV5 167 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 HPSE2Q8WWQ2 592 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 SHDQ96IW2 340 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 CNTNAP3Q9BZ76 1288 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 TMPRSS5Q9H3S3 457 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 AKIRIN1Q9H9L7 192 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 FBXL17Q9UF56 701 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 C19orf53Q9UNZ5 99 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 CDRT15L2A8MXV6 281 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ZBTB25P24278 435 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 TAGLN2P37802 199 aaKnown RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ANGPTL5Q86XS5 388 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 SAMD14Q8IZD0 417 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 NUDT9Q9BW91 350 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ADAM10O14672 748 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 RAP1AP62834 184 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 FMODQ06828 376 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 RASGEF1BQ0VAM2 473 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 LINC01590Q5TEZ4 76 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 PRAMEF8Q5VWM4 474 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 PRAMEF7Q5VXH5 474 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 PEG10Q86TG7 708 aaKnown RBP11.53□□□□□ -0.56
PTPRN-202ENST00000409251 SUMF2Q8NBJ7 301 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 OR9K2Q8NGE7 335 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 OR52N4Q8NGI2 321 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 NT5CQ8TCD5 201 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 C8orf44Q96CB5 159 aa11.53□□□□□ -0.56
PTPRN-202ENST00000409251 ICE1Q9Y2F5 2266 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 PMS2P1A4D2B8 440 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 TNFSF14O43557 240 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 CNOT4O95628 575 aaKnown RBP11.52□□□□□ -0.56
PTPRN-202ENST00000409251 IGHV2-70P01814 119 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 HOXC4P09017 264 aaPredicted RBP11.52□□□□□ -0.56
PTPRN-202ENST00000409251 TACR3P29371 465 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 ACAA2P42765 397 aaKnown RBP11.52□□□□□ -0.56
PTPRN-202ENST00000409251 CLEC18BQ6UXF7 455 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 ZNF813Q6ZN06 617 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 OR11A1Q9GZK7 315 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.52□□□□□ -0.56
PTPRN-202ENST00000409251 FGF21Q9NSA1 209 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 CUTCQ9NTM9 273 aa11.52□□□□□ -0.56
PTPRN-202ENST00000409251 BOD1L1Q8NFC6 3051 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 LMO7DNF2Z398 122 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 PPP1R2P9O14990 202 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 RPL12P30050 165 aaKnown RBP11.52□□□□□ -0.57
PTPRN-202ENST00000409251 NXPH1P58417 271 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 PSG6Q00889 435 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 PLAURQ03405 335 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 ZNF345Q14585 488 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 ZNF124Q15973 351 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 TSPO2Q5TGU0 170 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 SPEM1Q8N4L4 309 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 C15orf54Q8N8G6 183 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 TMEM229BQ8NBD8 167 aa11.52□□□□□ -0.57
PTPRN-202ENST00000409251 OR5H2Q8NGV7 314 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms