RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FN3KQ9H479 309 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 ELL3Q9HB65 397 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-203ENST00000409225 HAO2Q9NYQ3 351 aa13.51□□□□□ -0.25
CHMP3-203ENST00000409225 CDIPTO14735 213 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 ZNF682O95780 498 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 PF4V1P10720 104 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 SLC2A1P11166 492 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 FAHP16930 419 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 RPS27P42677 84 aaKnown RBP13.5□□□□□ -0.25
CHMP3-203ENST00000409225 SLC35A2P78381 396 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 PLA1AQ53H76 456 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 ARSJQ5FYB0 599 aaPredicted RBP13.5□□□□□ -0.25
CHMP3-203ENST00000409225 Q8N2B8 174 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 OR2T12Q8NG77 320 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 OR5D13Q8NGL4 314 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 WDR13Q9H1Z4 485 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
CHMP3-203ENST00000409225 UNC119BA6NIH7 251 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 PF4P02776 101 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 PRKXP51817 358 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 DRAM2Q6UX65 266 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 ZNF788Q6ZQV5 615 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 MKXQ8IYA7 352 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 FAM185AQ8N0U4 392 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 OR4K13Q8NH42 304 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 MED30Q96HR3 178 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
CHMP3-203ENST00000409225 COPS4Q9BT78 406 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 CDCA4Q9BXL8 241 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 WNT10AQ9GZT5 417 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 DNTTIP1Q9H147 329 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 OPA3Q9H6K4 179 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
CHMP3-203ENST00000409225 MRPL22Q9NWU5 206 aaKnown RBP13.49□□□□□ -0.25
CHMP3-203ENST00000409225 TRBV23-1A0A0A0MS06 115 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 E9PQ18 207 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 TIPRLO75663 272 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 HIST1H1CP16403 213 aaKnown RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 ZNF823P16415 610 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 HOXD3P31249 432 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 OTX1P32242 354 aaPredicted RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 OMPP47874 163 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 CNN3Q15417 329 aaKnown RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 IFI44LQ53G44 452 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 FGD3Q5JSP0 725 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 SMARCD3Q6STE5 483 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 ZBTB46Q86UZ6 589 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 TMEM219Q86XT9 240 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 RCC1LQ96I51 464 aaKnown RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 PRSS22Q9GZN4 317 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 ANKRD19PQ9H560 264 aa13.48□□□□□ -0.25
CHMP3-203ENST00000409225 GMPR2Q9P2T1 348 aaKnown RBP13.48□□□□□ -0.25
CHMP3-203ENST00000409225 MRASO14807 208 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 SIGLEC5O15389 551 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 TBX1O43435 398 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 XRCC2O43543 280 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 COX7A1P24310 79 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 DDOSTP39656 456 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 RAB13P51153 203 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 SLC7A2P52569 658 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 CAV3P56539 151 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 TMEM95Q3KNT9 176 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 FKBP9P1Q75LS8 142 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 CYP4Z1Q86W10 505 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 SDR9C7Q8NEX9 313 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 ANGPTL6Q8NI99 470 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 FANK1Q8TC84 345 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 HSH2DQ96JZ2 352 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 KCNG2Q9UJ96 466 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 RAB21Q9UL25 225 aa13.47□□□□□ -0.25
CHMP3-203ENST00000409225 OR6C68A6NDL8 312 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 TVP23AA6NH52 213 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 AKR7A2O43488 359 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 H1F0P07305 194 aaKnown RBP13.46□□□□□ -0.25
CHMP3-203ENST00000409225 ACAA1P09110 424 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-203ENST00000409225 PSKH1P11801 424 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 PAICSP22234 425 aaKnown RBP13.46□□□□□ -0.25
CHMP3-203ENST00000409225 GNALP38405 381 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 VDAC2P45880 294 aaPredicted RBP13.46□□□□□ -0.25
CHMP3-203ENST00000409225 GABRA2P47869 451 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 LGALS4P56470 323 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 MXRA7P84157 204 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 FAM3AP98173 230 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 COL10A1Q03692 680 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 TAF13Q15543 124 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 Q6ZS46 218 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 SLC16A9Q7RTY1 509 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 LHFPL4Q7Z7J7 247 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 TMEM185AQ8NFB2 350 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 OR4C15Q8NGM1 316 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 STON2Q8WXE9 905 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 RPL3LQ92901 407 aaKnown RBP13.46□□□□□ -0.25
CHMP3-203ENST00000409225 SPSB4Q96A44 273 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 TLNRD1Q9H1K6 362 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
CHMP3-203ENST00000409225 A6NDX4 124 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 GLCEO94923 617 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 NOS3P29474 1203 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 PYCR1P32322 319 aa13.45□□□□□ -0.26
CHMP3-203ENST00000409225 CD83Q01151 205 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms