RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RBM4BQ9BQ04 359 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 ELAC2Q9BQ52 826 aaKnown RBP7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 DPAGT1Q9H3H5 408 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 RNPEPL1Q9HAU8 725 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 IL20Q9NYY1 176 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 CD300AQ9UGN4 299 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 FAM96BQ9Y3D0 163 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 COMMD3-BMI1R4GMX3 469 aa7.55□□□□□ -1.2
NIF3L1-203ENST00000409129 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 A0A1B0GVI7 797 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 ZNF878C9JN71 531 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 ARPC2O15144 300 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 PIN1P1O15428 100 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 TBX1O43435 398 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 GASTP01350 101 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SLC15A1P46059 708 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 PROK1P58294 105 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 ELF3P78545 371 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 FAM3AP98173 230 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SAMD4BQ5PRF9 694 aaKnown RBP7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 Q6ZSV7 163 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 RASSF6Q6ZTQ3 369 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SLC16A9Q7RTY1 509 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SLC36A1Q7Z2H8 476 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 DPY19L4Q7Z388 723 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 WDR86Q86TI4 376 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 FGFRL1Q8N441 504 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 LINC00471Q8N535 108 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 OR1M1Q8NGA1 313 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 OR8D4Q8NGM9 314 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 NPRL2Q8WTW4 380 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 LRRC29Q8WV35 223 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 UBE2FQ969M7 185 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SGK3Q96BR1 496 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 CDRT15Q96T59 188 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 BTBD10Q9BSF8 475 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 NMNAT2Q9BZQ4 307 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 C16orf95Q9H693 158 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 SP140LQ9H930 580 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 TCF7L1Q9HCS4 588 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 CAB39Q9Y376 341 aaPredicted RBP7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 LYVE1Q9Y5Y7 322 aa7.54□□□□□ -1.2
NIF3L1-203ENST00000409129 A0A1B0GW55 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DHRS12A0PJE2 317 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 SLC22A31A6NKX4 558 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TNFRSF11BO00300 401 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 NDUFB3O43676 98 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TIPRLO75663 272 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TSPAN15O95858 294 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 APOC1P02654 83 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 GYPBP06028 91 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 ANXA2P07355 339 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 FBP1P09467 338 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L2P0CJ85 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L3P0CJ86 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L4P0CJ87 422 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L5P0CJ88 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L6P0CJ89 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L7P0CJ90 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 SPI1P17947 270 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 NAA10P41227 235 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TGM4P49221 684 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 CX3CR1P49238 355 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 BLVRAP53004 296 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 SLC25A1P53007 311 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 GRB2P62993 217 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 CRMP1Q14194 572 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TIGD6Q17RP2 521 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 WDR38Q5JTN6 314 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 ATPAF1Q5TC12 328 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4L9Q6RFH8 374 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 METAP1DQ6UB28 335 aaPredicted RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 WDR82Q6UXN9 313 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 CMTM4Q8IZR5 234 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 PGAM4Q8N0Y7 254 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 OR9Q2Q8NGE9 314 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 LRTOMTQ8WZ04 291 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 C12orf43Q96C57 262 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 SEH1LQ96EE3 360 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TSSK6Q9BXA6 273 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 TOR3AQ9H497 397 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 PPP1R3EQ9H7J1 279 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DUX4Q9UBX2 424 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 PRPF19Q9UMS4 504 aaKnown RBP7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 BAIAP2Q9UQB8 552 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
NIF3L1-203ENST00000409129 hCG_38984A0A1B0GV85 526 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 BTBD17A6NE02 478 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 RNASEK-C17orf49H0YIS7 233 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 ACOT8O14734 319 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 CDIPTO14735 213 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 TSPAN9O75954 239 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 CCNB2O95067 398 aa7.52□□□□□ -1.21
NIF3L1-203ENST00000409129 CLUP10909 449 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms