RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 EOMESO95936 686 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 RPS2P15880 293 aaKnown RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 EPHA1P21709 976 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 LBX1P52954 281 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 BTG2P78543 158 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 TMEM31Q5JXX7 168 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 MYOTQ9UBF9 498 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 OR52A1Q9UKL2 312 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 MRPS23Q9Y3D9 190 aaKnown RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 YIPF1Q9Y548 306 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 YLPM1P49750 1951 aaKnown RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 IFNL4K9M1U5 179 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 ABLIM3O94929 683 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 TK1P04183 234 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 FPR2P25090 351 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 GABRA3P34903 492 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 DNASE1L1P49184 302 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 RPS4XP62701 263 aaKnown RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 PRDX1Q06830 199 aaKnown RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 FAM53BQ14153 422 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 ZNF573Q86YE8 665 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 ZNF283Q8N7M2 679 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 OR52E1Q8NGJ3 308 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 LINC00615Q96LM1 132 aaPredicted RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 CCNL2Q96S94 520 aaPredicted RBP11.36□□□□□ -0.59
HERC3-203ENST00000407637 ABHD14AQ9BUJ0 271 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 LPAR2Q9HBW0 351 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 INSL5Q9Y5Q6 135 aa11.36□□□□□ -0.59
HERC3-203ENST00000407637 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 PCCBP05166 539 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 FSTP19883 344 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CTXN1P60606 82 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 H3F3AP84243 136 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 COL10A1Q03692 680 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 SLC17A1Q14916 467 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 EXOSC7Q15024 291 aaKnown RBP11.35□□□□□ -0.59
HERC3-203ENST00000407637 ABLIM2Q6H8Q1 611 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 ULK3Q6PHR2 472 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 C17orf78Q8N4C9 275 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 DTWD2Q8NBA8 298 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
HERC3-203ENST00000407637 OR2A1Q8NGT9 310 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CYB5D2Q8WUJ1 264 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 SMDT1Q9H4I9 107 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 B9D1Q9UPM9 204 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 DOCK8Q8NF50 2099 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 KNG1P01042 644 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 METAP1P53582 386 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 P2RY6Q15077 328 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 C1QL3Q5VWW1 255 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 ETFRF1Q6IPR1 90 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
HERC3-203ENST00000407637 Q7L0L9 218 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 C10orf53Q8N6V4 93 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 OR13C3Q8NGS6 347 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 OR13G1Q8NGZ3 307 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 FNDC9Q8TBE3 224 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 PTX4Q96A99 478 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 OR51B6Q9H340 312 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CNTD2Q9H8S5 307 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CDH20Q9HBT6 801 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 CHST11Q9NPF2 352 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 RHBDD3Q9Y3P4 386 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 FREM3P0C091 2139 aa11.35□□□□□ -0.59
HERC3-203ENST00000407637 XKRY2A2RUG3 117 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 XKRYO14609 159 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 XRCC2O43543 280 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 APBB3O95704 486 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 CHRM2P08172 466 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 IRF2P14316 349 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 FOSL2P15408 326 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 SELEP16581 610 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 RBX1P62877 108 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 PARS2Q7L3T8 475 aaKnown RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 AMZ2Q86W34 360 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 FAM185AQ8N0U4 392 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 OTOSQ8NHW6 89 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 V9GYS6 101 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 DOCK9Q9BZ29 2069 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 CEACAM18A8MTB9 384 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 MBPP02686 304 aaPredicted RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 PTGER4P35408 488 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 ICAM4Q14773 271 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 IQCJQ1A5X6 159 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 C1orf100Q5SVJ3 147 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 SLC8B1Q6J4K2 584 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 FDX2Q6P4F2 183 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 ZNF880Q6PDB4 577 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 SPSB3Q6PJ21 355 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 GALNTL5Q7Z4T8 443 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 SHISA5Q8N114 240 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 ZNF248Q8NDW4 579 aa11.34□□□□□ -0.59
HERC3-203ENST00000407637 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
HERC3-203ENST00000407637 NUS1Q96E22 293 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms