RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 DISC1C4P0D8 188 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 P2RY10O00398 339 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 EIF1AYO14602 144 aaKnown RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 GMDSO60547 372 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF780AO75290 641 aaPredicted RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 WNT11O96014 354 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 CYB5AP00167 134 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ALDOBP05062 364 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 GIPP09681 153 aaPredicted RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ACSM4P0C7M7 580 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 MSR1P21757 451 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 CTSSP25774 331 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 SRD5A2P31213 254 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 SFTPDP35247 375 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 TDGF1P3P51864 188 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF133P52736 654 aaPredicted RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 RBPJQ06330 500 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 C10orf128Q5T292 105 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 RAET1LQ5VY80 246 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 PLPP7Q8NBV4 271 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 FGGYQ96C11 551 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 NTNG2Q96CW9 530 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 C10orf35Q96D05 121 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 NPAS1Q99742 590 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
SMARCB1-203ENST00000407082 SHISA8B8ZZ34 492 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 H0YC42 278 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 LDLRAD4O15165 306 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 RGS11O94810 467 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 CLDN14O95500 239 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 TTRP02766 147 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 TBPP20226 339 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 RFC3P40938 356 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 VEGFCP49767 419 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 CLDN17P56750 224 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 H3F3AP84243 136 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ADORA2A-AS1P86434 159 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 PMP22Q01453 160 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 SPOCK1Q08629 439 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ARL6IP1Q15041 203 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 MPPED2Q15777 294 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF813Q6ZN06 617 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 TMEM54Q969K7 222 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 C14orf79Q96F83 325 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 GPR137Q96N19 417 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 GINS4Q9BRT9 223 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 NELFAQ9H3P2 528 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 MYOZ1Q9NP98 299 aaPredicted RBP11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 ZFP64Q9NPA5 681 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 DLL4Q9NR61 685 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 BOKQ9UMX3 212 aaPredicted RBP11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 LHFPL6Q9Y693 200 aa11.32□□□□□ -0.6
SMARCB1-203ENST00000407082 MTRF1O75570 445 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 RAB3DO95716 219 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 IFNA7P01567 189 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 CRYABP02511 175 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 CCL1P22362 96 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 EIF1AXP47813 144 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 SUCLG1P53597 346 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 GMFBP60983 142 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 PMPCAQ10713 525 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 FOXO1Q12778 655 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 ECH1Q13011 328 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 CDSNQ15517 529 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 MEX3BQ6ZN04 569 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 FOXL2NBQ6ZUU3 175 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF584Q8IVC4 421 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 SLC7A5P1Q8MH63 180 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 GABRG1Q8N1C3 465 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 PNLDC1Q8NA58 520 aaKnown RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 OR4C16Q8NGL9 310 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 PPP1R14AQ96A00 147 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 CPNE2Q96FN4 548 aaPredicted RBP11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 GNRHR2Q96P88 292 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 PRRT1Q99946 306 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 TMEM185BQ9H7F4 350 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 MGAT4CQ9UBM8 478 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 ZNF69Q9UC07 566 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 TINAGQ9UJW2 476 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 PLEKHA6Q9Y2H5 1048 aa11.31□□□□□ -0.6
SMARCB1-203ENST00000407082 IGKV1D-43A0A0B4J1Z2 117 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 OR2M5A3KFT3 312 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 LRRC3CA6NJW4 275 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 H3BSH0 61 aa11.3□□□□□ -0.6
SMARCB1-203ENST00000407082 ALX3O95076 343 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms