RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	DRAM2	Q6UX65	266 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPSB1	Q96BD6	273 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CFHR5	Q9BXR6	569 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DLL4	Q9NR61	685 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	H3F3C	Q6NXT2	135 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DHRS13	Q6UX07	377 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SSX9	Q7RTT3	188 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR52B4	Q8NGK2	314 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR1J1	Q8NGS3	322 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	KISS1R	Q969F8	398 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZFPL1	O95159	310 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CDKN2A	P42771	156 aa	Known RBP	11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PIGP	P57054	158 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CBLN3	Q6UW01	205 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SLC35E1	Q96K37	410 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SLC17A5	Q9NRA2	495 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF629	Q9UEG4	869 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TRBV5-3	A0A0A0MS03	114 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SEC14L6	B5MCN3	397 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CDC42EP2	O14613	210 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NME2P1	O60361	137 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CNIH1	O95406	144 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RAB1A	P62820	205 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ACER2	Q5QJU3	275 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	IL34	Q6ZMJ4	242 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CDH26	Q8IXH8	852 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF439	Q8NDP4	499 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR4D9	Q8NGE8	314 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NPIPB8	E9PQR5	432 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZIC2	O95409	532 aa	Predicted RBP	11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TGM1	P22735	817 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MPPED2	Q15777	294 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SLC16A12	Q6ZSM3	486 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	UBE3D	Q7Z6J8	389 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FAM185A	Q8N0U4	392 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OIT3	Q8WWZ8	545 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EPPIN	O95925	133 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C11orf91	Q3C1V1	193 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RHBDD2	Q6NTF9	364 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	DEGS2	Q6QHC5	323 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454		Q6ZRG5	221 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ARRDC1	Q8N5I2	433 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	IER2	Q9BTL4	223 aa		11.92	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MOSPD3	O75425	235 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FZD5	Q13467	585 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR2W3	Q7Z3T1	314 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	STRAP	Q9Y3F4	350 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TRAV17	A0A0B4J275	112 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TCAP	O15273	167 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TOX3	O15405	576 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SSSCA1	O60232	199 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GPANK1	O95872	356 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CLEC3B	P05452	202 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	INSL4	Q14641	139 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C8orf82	Q6P1X6	216 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ASB13	Q8WXK3	278 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	S1PR3	Q99500	378 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	KIR2DL1	P43626	348 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CBY3	A6NI87	242 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF724	A8MTY0	619 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ABCD4	O14678	606 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MT-ND4L	P03901	98 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RAC1	P63000	192 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GSG1	Q2KHT4	349 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GTF2H5	Q6ZYL4	71 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	NLRC3	Q7RTR2	1065 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CDC20B	Q86Y33	519 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	MTCH2	Q9Y6C9	303 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EVPL	Q92817	2033 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PCMT1	P22061	227 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	BAP18	Q8IXM2	172 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FBXL14	Q8N1E6	418 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPAG17	Q6Q759	2223 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	RER1	O15258	196 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OIP5	O43482	229 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	HYAL3	O43820	417 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EIF4EBP2	Q13542	120 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EXOSC2	Q13868	293 aa	Known RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	SPATA46	Q5T0L3	261 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR4S1	Q8NGB4	309 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR10P1	Q8NGE3	313 aa		11.91	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FABP1	P07148	127 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PWWP2B	Q6NUJ5	590 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	CMTM2	Q8TAZ6	248 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	EXTL1	Q92935	676 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZFP64	Q9NPA5	681 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	STRCP1	A6NGW2	1772 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	PYCARD-AS1	I3L0S3	204 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	IL5	P05113	134 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FUT3	P21217	361 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF766	Q5HY98	468 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	FBXW5	Q969U6	566 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TINAGL1	Q9GZM7	467 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	TRGV8	A0A0C4DH27	118 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	AKR7A2	O43488	359 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	OR2A2	Q6IF42	318 aa		11.9	□□□□□ -0.5
CACNA1C-222	ENST00000406454	GLDN	Q6ZMI3	551 aa	Predicted RBP	11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms