RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 DACT3Q96B18 629 aaPredicted RBP17.48■□□□□ 0.39
RHBDD3-202ENST00000406335 NRBF2Q96F24 287 aa17.48■□□□□ 0.39
RHBDD3-202ENST00000406335 SLC25A19Q9HC21 320 aa17.48■□□□□ 0.39
RHBDD3-202ENST00000406335 UFSP2Q9NUQ7 469 aa17.48■□□□□ 0.39
RHBDD3-202ENST00000406335 CENPVL3A0A0U1RRI6 287 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 CD300LBA8K4G0 201 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 TNFRSF13BO14836 293 aaPredicted RBP17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 GPR137BO60478 399 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 SELENOFO60613 162 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 ATP5HO75947 161 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 HMGN1P05114 100 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 RAD23AP54725 363 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 MAB21L1Q13394 359 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 KLHL12Q53G59 568 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 FAHD1Q6P587 224 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 PNLDC1Q8NA58 520 aaKnown RBP17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 OR5K1Q8NHB7 308 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 LHX4Q969G2 390 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 FAM96BQ9Y3D0 163 aa17.47■□□□□ 0.39
RHBDD3-202ENST00000406335 GGT3PA6NGU5 568 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 C22orf46C9J442 243 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 FSTL3O95633 263 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 CA6P23280 308 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 CX3CR1P49238 355 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 CRISP1P54107 249 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 GRB2P62993 217 aaKnown RBP17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 OR8B8Q15620 311 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 C1orf146Q5VVC0 180 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 SFRP4Q6FHJ7 346 aaPredicted RBP17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 SHFQ7M4L6 423 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 PDZD9Q8IXQ8 264 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 RNF133Q8WVZ7 376 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 ERGIC1Q969X5 290 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 WDFY2Q96P53 400 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 DPAGT1Q9H3H5 408 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 PAPOLBQ9NRJ5 636 aaKnown RBP17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 DNAJC27Q9NZQ0 273 aa17.46■□□□□ 0.39
RHBDD3-202ENST00000406335 TBX1O43435 398 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 CLPXO76031 633 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 TSPAN15O95858 294 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 IGHV4-59P01825 116 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 ANXA2P07355 339 aaKnown RBP17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 SLC2A5P22732 501 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 NAA10P41227 235 aaPredicted RBP17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 SLC15A1P46059 708 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 OR8G1Q15617 311 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 ATP6AP1Q15904 470 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 C2orf68Q2NKX9 166 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 PRAMEF6Q5VXH4 476 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 ZNF841Q6ZN19 808 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 GDPGP1Q6ZNW5 385 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 AMIGO2Q86SJ2 522 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 OR56B2PQ8NGI1 322 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 TVP23BQ9NYZ1 205 aa17.45■□□□□ 0.38
RHBDD3-202ENST00000406335 IGHV1-69DA0A0B4J2H0 117 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 BTBD17A6NE02 478 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 PRODHO43272 600 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 ADAM20O43506 726 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 MITFO75030 526 aaPredicted RBP17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 FAM20BO75063 409 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 ALX3O95076 343 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 IGHV1-69P01742 117 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 HSD11B1P28845 292 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 OPRL1P41146 370 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 CD200P41217 278 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 MPPED2Q15777 294 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 SNAPC1Q16533 368 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 PRSS45Q7RTY3 260 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 OTOSQ8NHW6 89 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 DNAJC9Q8WXX5 260 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 TBX15Q96SF7 602 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 TOR3AQ9H497 397 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 BRD7Q9NPI1 651 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 ZNF319Q9P2F9 582 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 KLHDC2Q9Y2U9 406 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 ZNF281Q9Y2X9 895 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 AP4S1Q9Y587 144 aa17.44■□□□□ 0.38
RHBDD3-202ENST00000406335 VWFP04275 2813 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 C3orf80F5H4A9 247 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 XRCC2O43543 280 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 CSF1P09603 554 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 PSMB10P40306 273 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 GATA4P43694 442 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 HCCSP53701 268 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 ZNF121P58317 390 aaPredicted RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 RPS7P62081 194 aaKnown RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 ARF6P62330 175 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 HOXA4Q00056 320 aaPredicted RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 APOFQ13790 326 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 PTGES3Q15185 160 aaKnown RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 FBLN7Q53RD9 439 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 HIST2H2BDQ6DRA6 164 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 DHRS7BQ6IAN0 325 aaPredicted RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 FAM57BQ71RH2 274 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 THEM6Q8WUY1 208 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 LRTOMTQ8WZ04 291 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 SPSB4Q96A44 273 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 ADAT1Q9BUB4 502 aaKnown RBP17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 RASSF4Q9H2L5 321 aa17.43■□□□□ 0.38
RHBDD3-202ENST00000406335 FN3KRPQ9HA64 309 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms