RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PATZ1Q9HBE1 687 aaKnown RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM9BQ9NQ34 198 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 XPNPEP1Q9NQW7 623 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 NYAP2Q9P242 653 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 UVRAGQ9P2Y5 699 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF282Q9UDV7 671 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 MRM2Q9UI43 246 aaKnown RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 NDRG2Q9UN36 371 aaKnown RBP3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 KPTNQ9Y664 436 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 URGCP-MRPS24S4R325 110 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 ADGRL3Q9HAR2 1447 aa3.42□□□□□ -1.86
HMGB1P13-201ENST00000406019 KIF24Q5T7B8 1368 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 IGLV1-36A0A0B4J1U3 117 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 E7EWF7 191 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 F8W036 122 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 MKRN2OSH3BPM6 223 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 XKRYO14609 159 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 GMDSO60547 372 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 GATBO75879 557 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CRHP06850 196 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 KLK1P06870 262 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 GUSBP08236 651 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC2A1P11166 492 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CRISP2P16562 243 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 DTYMKP23919 212 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CRABP1P29762 137 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 RBMXP38159 391 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CSKP41240 450 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CEBPGP53567 150 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 TAS2R60P59551 318 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 TIMM10P62072 90 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 DAZ2Q13117 558 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 TSC22D1Q15714 1073 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF630Q2M218 657 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CHRFAM7AQ494W8 412 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 COA6Q5JTJ3 125 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZNF691Q5VV52 312 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 KCTD16Q68DU8 428 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 APOBEC3HQ6NTF7 200 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZFP82Q8N141 532 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CYP4Z2PQ8N1L4 340 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 STPG2Q8N412 459 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 TMEM156Q8N614 296 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ZFP41Q8N8Y5 198 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 SUMF2Q8NBJ7 301 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ACER1Q8TDN7 264 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 NEK7Q8TDX7 302 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 NELFBQ8WX92 580 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 PYDC1Q8WXC3 89 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 PPP1R2P1Q96PQ5 205 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 SLC38A1Q9H2H9 487 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 CLMPQ9H6B4 373 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 DAZ3Q9NR90 486 aaKnown RBP3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 MMP26Q9NRE1 261 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 ABCB10Q9NRK6 738 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 TAS2R9Q9NYW1 312 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 HYOU1Q9Y4L1 999 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 MMACHCQ9Y4U1 282 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 USH1CQ9Y6N9 552 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 SCN2AQ99250 2005 aa3.41□□□□□ -1.86
HMGB1P13-201ENST00000406019 MTUS2Q5JR59 1369 aa3.4□□□□□ -1.86
HMGB1P13-201ENST00000406019 RAB3GAP2Q9H2M9 1393 aa3.4□□□□□ -1.86
HMGB1P13-201ENST00000406019 CAMTA1Q9Y6Y1 1673 aa3.4□□□□□ -1.86
HMGB1P13-201ENST00000406019 GTF3C1Q12789 2109 aa3.4□□□□□ -1.86
HMGB1P13-201ENST00000406019 A0A1W2PQL4 384 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC5A10A0PJK1 596 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 MGAT4DA6NG13 374 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 GJE1A6NN92 205 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 hCG_2039718K7EN88 272 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 M0QXV9 152 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 PLPP1O14494 284 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ARPC5O15511 151 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TRAF3IP2O43734 574 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ETHE1O95571 254 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ACTL6AO96019 429 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 APOC1P02654 83 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 OR5H8P0DN80 308 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 GFAPP14136 432 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 CSNK2A2P19784 350 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 FUT3P21217 361 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 MAS1LP35410 378 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 COILP38432 576 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TGM4P49221 684 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 CAV2P51636 162 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM33P57088 247 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 GNB2P62879 340 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 FLI1Q01543 452 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 BNIP2Q12982 314 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TAF1AQ15573 450 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 SLC9A3R2Q15599 337 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZNHIT3Q15649 155 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TMEM249Q2WGJ8 235 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 RFX4Q33E94 735 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 ZBED5Q49AG3 693 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TPRG1LQ5T0D9 272 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 TPTE2P1Q5T6R2 138 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 CD300LGQ6UXG3 332 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 MBOAT2Q6ZWT7 520 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.87
HMGB1P13-201ENST00000406019 FUNDC1Q8IVP5 155 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms