RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 OR5H6Q8NGV6 325 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ADAT1Q9BUB4 502 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 SRXN1Q9BYN0 137 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 SLIRPQ9GZT3 109 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 ZNF275Q9NSD4 429 aaPredicted RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 B3GNT2Q9NY97 397 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 KLHDC2Q9Y2U9 406 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 A0A1B0GVG6 124 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 TMEM82A0PJX8 343 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 FUOMA2VDF0 154 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 GABARAPH6UMI1 98 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 HLA-AP01891 365 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 EPHA1P21709 976 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 CCR6P51684 374 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 FUT6P51993 359 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 TAS2R31P59538 309 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 GNG3P63215 75 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 EIF5AP63241 154 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 GNMTQ14749 295 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 RBMS2Q15434 407 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 KISS1Q15726 138 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ZNF695Q8IW36 515 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 FBXL14Q8N1E6 418 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OR2Z1Q8NG97 314 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ABHD17AQ96GS6 310 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 BOD1Q96IK1 185 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 KCNK17Q96T54 332 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OR2B2Q9GZK3 357 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 MOV10Q9HCE1 1003 aaKnown RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 OR2S2Q9NQN1 319 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ZNF391Q9UJN7 358 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OSGIN2Q9Y236 505 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 BOLA2-SMG1P6H3BVE0 249 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 PRAF2O60831 178 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 AGFG2O95081 481 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 PMP2P02689 132 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 SFTPCP11686 197 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 PTGER4P35408 488 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 SLC9A3R2Q15599 337 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 GRK1Q15835 563 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 KIF26BQ2KJY2 2108 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 KRTCAP3Q53RY4 240 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ACTBL2Q562R1 376 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 BHLHA15Q7RTS1 189 aaPredicted RBP8.02□□□□□ -1.13
LIG4-202ENST00000405925 LYSMD2Q8IV50 215 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 ADPRHL1Q8NDY3 354 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OR56B4Q8NH76 319 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 MAFIPQ8WZ33 124 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 OR2H1Q9GZK4 316 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 KLK13Q9UKR3 277 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 FOXJ3Q9UPW0 622 aa8.02□□□□□ -1.13
LIG4-202ENST00000405925 NKX6-3A6NJ46 265 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 AHRRA9YTQ3 701 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 TMEM229AB2RXF0 380 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 GOSR2O14653 212 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PET100P0DJ07 73 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 GAAP10253 952 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PPP1CBP62140 327 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 CAMK2BQ13554 666 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 POU4F3Q15319 338 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 AKIRIN2Q53H80 203 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PLA2G2CQ5R387 149 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ASCL5Q7RTU5 278 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 SUMF1Q8NBK3 374 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 OR52N4Q8NGI2 321 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 AMELYQ99218 206 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 TIMP4Q99727 224 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZNF471Q9BX82 626 aaPredicted RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 RBM38Q9H0Z9 239 aaKnown RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 KCNJ16Q9NPI9 418 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 HELZP42694 1942 aaKnown RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 ACACBO00763 2458 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 OGG1O15527 345 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZIC3O60481 467 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 LPLP06858 475 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 HOXB5P09067 269 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PGA4P0DJD7 388 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PGA3P0DJD8 388 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PDCD1Q15116 288 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZNF441Q8N8Z8 693 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZNF610Q8N9Z0 462 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 RAB39BQ96DA2 213 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 FAIMQ9NVQ4 179 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 SC5DO75845 299 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 GNB3P16520 340 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 MMP16P51512 607 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 PRDX4Q13162 271 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 IRF3Q14653 427 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 C1orf185Q5T7R7 199 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 FAM27BQ5VT28 67 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 FJX1Q86VR8 437 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 CPEB3Q8NE35 698 aaKnown RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 OR51A4Q8NGJ6 313 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 POC1BQ8TC44 478 aa8.01□□□□□ -1.13
LIG4-202ENST00000405925 ZNF552Q9H707 407 aaPredicted RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 MRPS18AQ9NVS2 196 aaKnown RBP8.01□□□□□ -1.13
LIG4-202ENST00000405925 PLEKHB1Q9UF11 243 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms