RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 ZNF93P35789 620 aaPredicted RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 GUK1Q16774 197 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 MESTQ5EB52 335 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 TMEM244Q5VVB8 128 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 GLIPR1L1Q6UWM5 242 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 MEX3BQ6ZN04 569 aaKnown RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 OR56B1Q8NGI3 324 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 OR5D14Q8NGL3 314 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 OR1J1Q8NGS3 322 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 TMEM234Q8WY98 164 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 RGP1Q92546 391 aaPredicted RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 HGDQ93099 445 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 CDCA3Q99618 268 aaPredicted RBP10.7□□□□□ -0.7
HMGB1-206ENST00000405805 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
HMGB1-206ENST00000405805 LRP3O75074 770 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 OR2F2O95006 317 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 ABOP16442 354 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CDAP32320 146 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RPL27P61353 136 aaKnown RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PJVKQ0ZLH3 352 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 OR2F1Q13607 317 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 HMGN3Q15651 99 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RTL6Q6ICC9 239 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 TOMM20LQ6UXN7 152 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CCDC54Q8NEL0 328 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PARD6AQ9NPB6 346 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SUSD2Q9UGT4 822 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 LRP12Q9Y561 859 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PRSS37A4D1T9 235 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 B4E171 279 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SLC17A2O00624 439 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 LMX1BO60663 402 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CSNK1EP49674 416 aaKnown RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RAG2P55895 527 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NHLH2Q02577 135 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 MFGE8Q08431 387 aaPredicted RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NT5CQ8TCD5 201 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PIGTQ969N2 578 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 URM1Q9BTM9 101 aaKnown RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 HEXA-AS1Q9H8Q6 139 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 FAM212BQ9NTI7 297 aaPredicted RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 TRAV36DV7A0A075B6V5 113 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SEC14L6B5MCN3 397 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PRAMEF26H0Y7S4 382 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 ARPC3O15145 178 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NXPH3O95157 252 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CT45A8P0DMV1 189 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CT45A9P0DMV2 189 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NR0B2Q15466 257 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 CT45A2Q5DJT8 189 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 ANKRD16Q6P6B7 361 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 C11orf42Q8N5U0 333 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 EID2Q8N6I1 236 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 OTOSQ8NHW6 89 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RAB33BQ9H082 229 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SERINC1Q9NRX5 453 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 HAO2Q9NYQ3 351 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PILRAQ9UKJ1 303 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RNF215Q9Y6U7 377 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 TCF20Q9UGU0 1960 aaKnown RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 XIRP2A4UGR9 3374 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 MPDZO75970 2070 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 ESPL1Q14674 2120 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 FAM230AA0A1W2PPH8 454 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 PLSCR5A0PG75 271 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 E9PQ18 207 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 WNT11O96014 354 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 FCARP24071 287 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 BLVRBP30043 206 aaPredicted RBP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 RPS11P62280 158 aaKnown RBP eCLIP10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NCR3LG1Q68D85 454 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 NAXDQ8IW45 347 aa10.69□□□□□ -0.7
HMGB1-206ENST00000405805 SULT2B1O00204 365 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 RPLP1P05386 114 aaKnown RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 HLA-DOBP13765 273 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 ZNF43P17038 809 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 CD96P40200 585 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 KIR2DL1P43626 348 aaPredicted RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 MOGAT2Q3SYC2 334 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 C15orf54Q8N8G6 183 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 PNPLA2Q96AD5 504 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 METTL9Q9H1A3 318 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 GEMIN2O14893 280 aaKnown RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 NUDT21O43809 227 aaKnown RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 IL5P05113 134 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 STPG1Q5TH74 334 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 UQCC3Q6UW78 93 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 VSTM2LQ96N03 204 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 TMEM59Q9BXS4 323 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 LMAN1LQ9HAT1 526 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 CDH23Q9H251 3354 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 RFPL4AA6NLU0 287 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 C5orf67F2Z3F1 127 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 RFPL4AL1F8VTS6 287 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 TLX3O43711 291 aaPredicted RBP10.68□□□□□ -0.7
HMGB1-206ENST00000405805 ZNF117Q03924 483 aa10.68□□□□□ -0.7
HMGB1-206ENST00000405805 MEF2DQ14814 521 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms