RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 COLCA1Q6ZS62 124 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 RNF144BQ7Z419 303 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR5AS1Q8N127 324 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 MFSD4AQ8N468 514 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 STEAP2Q8NFT2 490 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR5L1Q8NGL2 311 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 DVL3Q92997 716 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 KCTD12Q96CX2 325 aaKnown RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR2J1Q9GZK6 312 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 WDR12Q9GZL7 423 aaKnown RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 STEAP1Q9UHE8 339 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FZR1Q9UM11 496 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 AMDHD2Q9Y303 409 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 RHBDD3Q9Y3P4 386 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 V9GYS6 101 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 AKAP6Q13023 2319 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 USP9XQ93008 2570 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 IGHV1-18A0A0C4DH31 117 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IGKV1-9A0A0C4DH69 117 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 NKX2-6A6NCS4 301 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ZNF850A8MQ14 1090 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 GMDSO60547 372 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 SMPD2O60906 423 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 NRASP01111 189 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PRB1P04280 392 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 EIF4EP06730 217 aaKnown RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 ERCC1P07992 297 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 ARSBP15848 533 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CCKARP32238 428 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 UCP2P55851 309 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PPP1CBP62140 327 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 TLE1Q04724 770 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 TNK1Q13470 666 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 DCTN2Q13561 401 aaKnown RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 WFDC8Q8IUA0 241 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IZUMO1Q8IYV9 350 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 NKAIN3Q8N8D7 197 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR4D6Q8NGJ1 314 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR1J1Q8NGS3 322 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CA5BP1Q8WTZ4 195 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PP6455Q8WZ26 134 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FAM46BQ96A09 425 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FAM3DQ96BQ1 224 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 RADILQ96JH8 1075 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 REPIN1Q9BWE0 567 aaKnown RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 CHST5Q9GZS9 411 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CNTD2Q9H8S5 307 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ELL3Q9HB65 397 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 OBP2BQ9NPH6 170 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 TBCCD1Q9NVR7 557 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ABRACLQ9P1F3 81 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 EXTL2Q9UBQ6 330 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR5V1Q9UGF6 321 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ZNF391Q9UJN7 358 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ADAM30Q9UKF2 790 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IGHV2OR16-5A0A0B4J2B6 119 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ZNF816-ZNF321PA0A0X1KG74 233 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 LOC390937A0A1W2PQ73 354 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 SLC17A2O00624 439 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 GNLYP22749 145 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CHRNB4P30926 498 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 THBS4P35443 961 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 POU3F4P49335 361 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 FABP6P51161 128 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 MTCP1P56278 107 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PLA2G7Q13093 441 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 C2orf76Q3KRA6 126 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PYDC2Q56P42 97 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CLVS2Q5SYC1 327 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 PLCXD3Q63HM9 321 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 AWAT2Q6E213 333 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR10K2Q6IF99 312 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 VHLLQ6RSH7 139 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 METAP1DQ6UB28 335 aaPredicted RBP3.2□□□□□ -1.9
RTN4-208ENST00000404909 MOB3CQ70IA8 216 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CCDC190Q86UF4 302 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ANGPTL5Q86XS5 388 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 OR8H2Q8N162 312 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 SYNPRQ8TBG9 265 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 CMBLQ96DG6 245 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 SORCS2Q96PQ0 1159 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ABCB10Q9NRK6 738 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 C14orf119Q9NWQ9 140 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 ELOVL5Q9NYP7 299 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 NPAP1Q9NZP6 1156 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 GPR160Q9UJ42 338 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 SPATA2Q9UM82 520 aa3.2□□□□□ -1.9
RTN4-208ENST00000404909 IGHV3-64DA0A0J9YX35 117 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 LINC00854A0A1B0GVQ3 168 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CD300LBA8K4G0 201 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 LILRA1O75019 489 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CRYAAP02489 173 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 CALCRP30988 508 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 RAD52P43351 418 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR3A4PP47883 348 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 EVX1P49640 407 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 NAAAQ02083 359 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 ZNF45Q02386 682 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 OR8B8Q15620 311 aa3.19□□□□□ -1.9
RTN4-208ENST00000404909 KISS1Q15726 138 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms