RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 ARFRP1Q13795 201 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SURF2Q15527 256 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 C10orf91Q5T1B1 145 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 RTL6Q6ICC9 239 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 RNF144BQ7Z419 303 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 RTN4RL2Q86UN3 420 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SLC22A8Q8TCC7 542 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 OR5B2Q96R09 309 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SOX7Q9BT81 388 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 MYOTQ9UBF9 498 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 DNAJB11Q9UBS4 358 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 PHF3Q92576 2039 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 NDUFA2O43678 99 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 RAD51DO75771 328 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SLC2A1P11166 492 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 ICAM2P13598 275 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 EIF1P41567 113 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 OR3A2P47893 321 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 LSM6P62312 80 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 EIF5AP63241 154 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 DCDP81605 110 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SIGLEC14Q08ET2 396 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 FAM69BQ5VUD6 431 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 CPEB2Q7Z5Q1 589 aaKnown RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 SLC38A9Q8NBW4 561 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 OR2M3Q8NG83 312 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 PAQR8Q8TEZ7 354 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 C2orf50Q96LR7 162 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 RTBDNQ9BSG5 229 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 MMP26Q9NRE1 261 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 ZNF629Q9UEG4 869 aaPredicted RBP9.47□□□□□ -0.89
CLIP4-204ENST00000404424 NDRG3Q9UGV2 375 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 OSGIN2Q9Y236 505 aa9.47□□□□□ -0.89
CLIP4-204ENST00000404424 A0A1W2PNR3 127 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 AQP7P3A6NL99 342 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 CA11O75493 328 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 IGLV3-1P01715 115 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 ECI1P42126 302 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 SUPT4H1P63272 117 aaKnown RBP9.46□□□□□ -0.89
CLIP4-204ENST00000404424 PPA1Q15181 289 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 SLC9A3R2Q15599 337 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 AADACL3Q5VUY0 350 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 CARD17Q5XLA6 110 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 FAM57BQ71RH2 274 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 OR10G3Q8NGC4 313 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 OR51T1Q8NGJ9 327 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 OR10Z1Q8NGY1 313 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 EMG1Q92979 244 aaKnown RBP9.46□□□□□ -0.89
CLIP4-204ENST00000404424 RRNAD1Q96FB5 475 aaKnown RBP9.46□□□□□ -0.89
CLIP4-204ENST00000404424 CNTNAP3BQ96NU0 1288 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 MESP1Q9BRJ9 268 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 CARHSP1Q9Y2V2 147 aaKnown RBP9.46□□□□□ -0.89
CLIP4-204ENST00000404424 ADAMTS20P59510 1910 aa9.46□□□□□ -0.89
CLIP4-204ENST00000404424 IGKV1-9A0A0C4DH69 117 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 A0A1W2PP11 408 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 FOXI3A8MTJ6 420 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 SERPINE3A8MV23 424 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 TAAR5O14804 337 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 ADAP1O75689 374 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 FAM157CP0CG43 387 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 NAT2P11245 290 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 THBS4P35443 961 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 GUCA1AP43080 201 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 PTGFRP43088 359 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 AFF3P51826 1226 aaKnown RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 ARHGDIBP52566 201 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 SCRN3Q0VDG4 424 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 KISS1Q15726 138 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 CCDC54Q8NEL0 328 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 OR13G1Q8NGZ3 307 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 DNASE2BQ8WZ79 361 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 SAT2Q96F10 170 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 SLC26A1Q9H2B4 701 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 METTL8Q9H825 291 aaKnown RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 C19orf25Q9UFG5 118 aaPredicted RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 MRPS17Q9Y2R5 130 aaKnown RBP9.46□□□□□ -0.9
CLIP4-204ENST00000404424 MEMO1Q9Y316 297 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 PRELID3BQ9Y3B1 194 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 SPAG17Q6Q759 2223 aa9.46□□□□□ -0.9
CLIP4-204ENST00000404424 A0A0U1RQV5 110 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 H7C2Y5 167 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 KCNAB3O43448 404 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 OR2J2O76002 312 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 ONECUT2O95948 504 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 CSTBP04080 98 aaKnown RBP9.45□□□□□ -0.9
CLIP4-204ENST00000404424 MYF5P13349 255 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 DHPSP49366 369 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-204ENST00000404424 SNU13P55769 128 aaKnown RBP9.45□□□□□ -0.9
CLIP4-204ENST00000404424 CSNK2A1P68400 391 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-204ENST00000404424 SLC35A1P78382 337 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 ANKRD55Q3KP44 614 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 EIF5AL1Q6IS14 154 aaKnown RBP9.45□□□□□ -0.9
CLIP4-204ENST00000404424 ZNF585AQ6P3V2 769 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 SPAG16Q8N0X2 631 aa9.45□□□□□ -0.9
CLIP4-204ENST00000404424 PUSL1Q8N0Z8 303 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms