RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 SLC7A6OSQ96CW6 309 aaPredicted RBP12.75□□□□□ -0.37
TPM1-207ENST00000403994 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 RGCCQ9H4X1 137 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 SLC25A19Q9HC21 320 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 DNAJB9Q9UBS3 223 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 POMPQ9Y244 141 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 RHBDD3Q9Y3P4 386 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 IGHV3OR15-7A0A075B7D8 119 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
TPM1-207ENST00000403994 NDUFA2O43678 99 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 TIPRLO75663 272 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 HMGN1P05114 100 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 MMP9P14780 707 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 ACKR3P25106 362 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 GNALP38405 381 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 SLC35D3Q5M8T2 416 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 TMEM236Q5W0B7 351 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 CD276Q5ZPR3 534 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 WDR82Q6UXN9 313 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 C11orf53Q8IXP5 236 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 PAPD5Q8NDF8 572 aaKnown RBP12.74□□□□□ -0.37
TPM1-207ENST00000403994 BCAS4Q8TDM0 211 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 ITPKCQ96DU7 683 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 PCGF1Q9BSM1 259 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 TLNRD1Q9H1K6 362 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 YY1AP1Q9H869 796 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 KIF17Q9P2E2 1029 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 LRP12Q9Y561 859 aa12.74□□□□□ -0.37
TPM1-207ENST00000403994 A0A1B0GW55 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 ZNF879B4DU55 563 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 TMPRSS2O15393 492 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DNAJC8O75937 253 aaPredicted RBP12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L2P0CJ85 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L3P0CJ86 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L4P0CJ87 422 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L5P0CJ88 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L6P0CJ89 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L7P0CJ90 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 RPS7P62081 194 aaKnown RBP12.73□□□□□ -0.37
TPM1-207ENST00000403994 ELF3P78545 371 aaPredicted RBP12.73□□□□□ -0.37
TPM1-207ENST00000403994 FOXL1Q12952 345 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 GPR157Q5UAW9 335 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 RUSC1-AS1Q66K80 236 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4L9Q6RFH8 374 aaPredicted RBP12.73□□□□□ -0.37
TPM1-207ENST00000403994 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.73□□□□□ -0.37
TPM1-207ENST00000403994 FTMTQ8N4E7 242 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 OR8B12Q8NGG6 310 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 THEM6Q8WUY1 208 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 LYZL4Q96KX0 146 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 RNPEPL1Q9HAU8 725 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 DUX4Q9UBX2 424 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 PCDHGB1Q9Y5G3 927 aa12.73□□□□□ -0.37
TPM1-207ENST00000403994 CCDC182A6NF36 153 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 DVL1O14640 695 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 TOX4O94842 621 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 MUC1P15941 1255 aaPredicted RBP12.72□□□□□ -0.37
TPM1-207ENST00000403994 IL5RAQ01344 420 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 POU4F2Q12837 409 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 PRDX4Q13162 271 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 APOFQ13790 326 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 SNCBQ16143 134 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 MICBQ29980 383 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 DEFB112Q30KQ8 113 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 WDR38Q5JTN6 314 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 FAHD1Q6P587 224 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 FGFRL1Q8N441 504 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 FAM216BQ8N7L0 139 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
TPM1-207ENST00000403994 HPSE2Q8WWQ2 592 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 DNAJC9Q8WXX5 260 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 PKP2Q99959 881 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 RTL8AQ9BWD3 113 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 TEX12Q9BXU0 123 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 FGF23Q9GZV9 251 aaPredicted RBP12.72□□□□□ -0.37
TPM1-207ENST00000403994 SIRPDQ9H106 197 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 RASSF4Q9H2L5 321 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 PAPOLBQ9NRJ5 636 aaKnown RBP12.72□□□□□ -0.37
TPM1-207ENST00000403994 ZNF391Q9UJN7 358 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 LAMP5Q9UJQ1 280 aa12.72□□□□□ -0.37
TPM1-207ENST00000403994 ANXA2P2A6NMY6 339 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 P2RY10O00398 339 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 CDIPTO14735 213 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 HOXA3O43365 443 aaPredicted RBP12.71□□□□□ -0.37
TPM1-207ENST00000403994 LIPFP07098 398 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 MRPL3P09001 348 aaKnown RBP12.71□□□□□ -0.37
TPM1-207ENST00000403994 ALOX5APP20292 161 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 METTL11BQ5VVY1 283 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 BTN2A1Q7KYR7 527 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 GALNT4Q8N4A0 578 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 SGMS2Q8NHU3 365 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 TAF15Q92804 592 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM1-207ENST00000403994 UTP4Q969X6 686 aaKnown RBP12.71□□□□□ -0.37
TPM1-207ENST00000403994 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
TPM1-207ENST00000403994 NRBF2Q96F24 287 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms