RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 RIMS3Q9UJD0 308 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 HIST1H1TP22492 207 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 FUT2Q10981 343 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ADPRMQ3LIE5 342 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 OVOL2Q9BRP0 275 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 MRIQ9BWK5 157 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 LINC00862A6NCI5 91 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CSF2RBP32927 897 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ZNF77Q15935 545 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 LIPNQ5VXI9 398 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 APOBEC3HQ6NTF7 200 aaKnown RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SIAH3Q8IW03 269 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 PWWP2AQ96N64 755 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 DUSP23Q9BVJ7 150 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SSBP4Q9BWG4 385 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 GAMTQ14353 236 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 VAX1Q5SQQ9 334 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 RNF133Q8WVZ7 376 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 PTX4Q96A99 478 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 FAM3DQ96BQ1 224 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SPCS1Q9Y6A9 102 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 WSB1Q9Y6I7 421 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SCN10AQ9Y5Y9 1956 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SS18L1O75177 396 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CER1O95813 267 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 ID2Q02363 134 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC35D3Q5M8T2 416 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 OR2A2Q6IF42 318 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 DYNLRB2Q8TF09 96 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SCMH1Q96GD3 660 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 PRDM15P57071 1507 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 RBP4P02753 201 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 MPC1LP0DKB6 136 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC19A1P41440 591 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 LY6KQ17RY6 165 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 MICBQ29980 383 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 TIFABQ6ZNK6 161 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 SLC35B2Q8TB61 432 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 NUDCD2Q8WVJ2 157 aa7.84□□□□□ -1.15
CACNA1C-220ENST00000399655 CYP1B1Q16678 543 aa7.84□□□□□ -1.16
CACNA1C-220ENST00000399655 MRPL54Q6P161 138 aaKnown RBP7.84□□□□□ -1.16
CACNA1C-220ENST00000399655 Q8IYB0 196 aa7.84□□□□□ -1.16
CACNA1C-220ENST00000399655 LGALS1P09382 135 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ASTLQ6HA08 431 aaPredicted RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 RHOXF1Q8NHV9 184 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 LRRK1Q38SD2 2015 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 H3BRM9 83 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 FBXO45P0C2W1 286 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 CEACAM3P40198 252 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 WASP42768 502 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 CAMPP49913 170 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 FOXO4P98177 505 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ABHD4Q8TB40 342 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MRAPQ8TCY5 172 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 OR8B2Q96RD0 313 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF737O75373 536 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 OPN1LWP04000 364 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SCG5P05408 212 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 OR8G3PP0DMU2 310 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 COL8A1P27658 744 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC6A1P30531 599 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 TBPL1P62380 186 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM178AQ8NBL3 297 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 NXT1Q9UKK6 140 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZFAND5O76080 213 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 NXPH3O95157 252 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MT-CO3P00414 261 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 THBS4P35443 961 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 TRA2BP62995 288 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SH3RF2Q8TEC5 729 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 DERL3Q96Q80 235 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MIDNQ504T8 468 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZC3HAV1LQ96H79 300 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF688P0C7X2 276 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SIRPAP78324 504 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF506Q5JVG8 444 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 CYSLTR1Q9Y271 337 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MAPKBP1O60336 1514 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 A0A1W2PQM1 296 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 CT83Q5H943 113 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 WDR89Q96FK6 387 aaPredicted RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SLC23A1Q9UHI7 598 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF346Q9UL40 294 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ENTPD2Q9Y5L3 495 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MOSPD3O75425 235 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 TMEM33P57088 247 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 WDR92Q96MX6 357 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 NSUN3Q9H649 340 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 ZNF609O15014 1411 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 SRSF6Q13247 344 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 OR10G8Q8NGN5 311 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 APOBEC4Q8WW27 367 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 MAP6Q96JE9 813 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 C2orf50Q96LR7 162 aa7.83□□□□□ -1.16
CACNA1C-220ENST00000399655 NCR1O76036 304 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 IGHV4-34P06331 123 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 OR3A4PP47883 348 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 WDR25Q64LD2 544 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 MBLAC2Q68D91 279 aa7.82□□□□□ -1.16
CACNA1C-220ENST00000399655 RTN4RL1Q86UN2 441 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms