RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 TMEM64Q6YI46 380 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 RNF165Q6ZSG1 346 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 DEFB123Q8N688 67 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF738Q8NE65 137 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR52I1Q8NGK6 324 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 APOBEC4Q8WW27 367 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 UBE2E3Q969T4 207 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF354BQ96LW1 612 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 TIMM29Q9BSF4 260 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 APOOQ9BUR5 198 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 MROQ9BYG7 248 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 LAT2Q9GZY6 243 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF430Q9H8G1 570 aaPredicted RBP5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 ISG20L2Q9H9L3 353 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 CCDC59Q9P031 241 aaKnown RBP5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 KCNG2Q9UJ96 466 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC7A7Q9UM01 511 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 A3GALT2U3KPV4 340 aa5.45□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1B0GVI7 797 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 LRRC30A6NM36 301 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 H0Y980 276 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TCAPO15273 167 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FADS1O60427 444 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC19A2O60779 497 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 UPK1BO75841 260 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TSPAN19P0C672 248 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 PRF1P14222 555 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TBXA2RP21731 343 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 NR0B1P51843 470 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 VSX2P58304 361 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OC90Q02509 493 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 DPTQ07507 201 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 GPR18Q14330 331 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ELOA3BQ3SY89 546 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM52BQ4KMG9 183 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 AGAP7PQ5VUJ5 663 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CPEB2Q7Z5Q1 589 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 AMIGO1Q86WK6 493 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 APRG1Q8IVJ8 170 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RFLNBQ8N5W9 214 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM217Q8N7C4 229 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CCDC54Q8NEL0 328 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ELOA3Q8NG57 546 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR52P1PQ8NH57 321 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RNASEH2CQ8TDP1 164 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CXorf58Q96LI9 332 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ZNF582Q96NG8 517 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 AGAP4Q96P64 663 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 GFM1Q96RP9 751 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SDHCQ99643 169 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 MCHR1Q99705 422 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 IFT27Q9BW83 186 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SYT4Q9H2B2 425 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ACSS1Q9NUB1 689 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 MIOXQ9UGB7 285 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR14J1Q9UGF5 321 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ASB4Q9Y574 426 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 PLXNA2O75051 1894 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 B4DGG1 531 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SURF4O15260 269 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RDH16O75452 317 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CSNK2A2P19784 350 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CD1CP29017 333 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SRD5A2P31213 254 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RPS27P42677 84 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SOX2P48431 317 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM50BP56557 158 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CLRN1P58418 232 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 COPZ1P61923 177 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 EWSR1Q01844 656 aaKnown RBP eCLIP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FOXC1Q12948 553 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FOXL1Q12952 345 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 INPP5JQ15735 1006 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CSRP2Q16527 193 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ENTPD8Q5MY95 495 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RSBN1Q5VWQ0 802 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TCEAL6Q6IPX3 200 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FAM131AQ6UXB0 335 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 PAMR1Q6UXH9 720 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMPRSS11FQ6ZWK6 438 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CADM2Q8N3J6 435 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 TMEM251Q8N6I4 163 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 OR1J2Q8NGS2 313 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 RPLP0P6Q8NHW5 317 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SNAPC3Q92966 411 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 DDA1Q9BW61 102 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 ANKRD19PQ9H560 264 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 UBE2ZQ9H832 354 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 DDX31Q9H8H2 851 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 BEX1Q9HBH7 125 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 SLC2A4RGQ9NR83 387 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 MRPS28Q9Y2Q9 187 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 CDH10Q9Y6N8 788 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1B0GTI1 187 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 A0A1B0GV90 55 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 H0YL77 283 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FGF17O60258 216 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 EIF1BO60739 113 aaKnown RBP5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 FZD7O75084 574 aa5.44□□□□□ -1.54
TRAPPC13-202ENST00000399438 UTS2O95399 124 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms