RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 IL15RAQ13261 267 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 MIDNQ504T8 468 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 AADACL3Q5VUY0 350 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 KLHL24Q6TFL4 600 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.38□□□□□ -0.43
APOB-202ENST00000399256 GKN2Q86XP6 184 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 FAM71E2Q8N5Q1 922 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 FAM24BQ8N5W8 94 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 SLAMF6Q96DU3 332 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 SLC46A1Q96NT5 459 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 F5P12259 2224 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 METTL12A8MUP2 240 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 B4DGG1 531 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 NPIPA5E9PKD4 350 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 CDC14BO60729 498 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 NDUFS6O75380 124 aaKnown RBP12.38□□□□□ -0.43
APOB-202ENST00000399256 SLC2A1P11166 492 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 GSK3AP49840 483 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 MMP16P51512 607 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 FOXK1P85037 733 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 ZNF616Q08AN1 781 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 IAH1Q2TAA2 248 aaPredicted RBP12.38□□□□□ -0.43
APOB-202ENST00000399256 Q7L0L9 218 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 GPBAR1Q8TDU6 330 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 TCEAL7Q9BRU2 100 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 RAB33BQ9H082 229 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 EHFQ9NZC4 300 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 NPIPA1Q9UND3 350 aa12.38□□□□□ -0.43
APOB-202ENST00000399256 CRTAPO75718 401 aaPredicted RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 IGHV2-70P01814 119 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 IGHMP01871 453 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 CHRM2P08172 466 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 RPS2P15880 293 aaKnown RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 GLP1RP43220 463 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 CSNK2A1P68400 391 aaPredicted RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 ACTBL2Q562R1 376 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 NCMAPQ5T1S8 102 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ZNF600Q6ZNG1 722 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 PEG10Q86TG7 708 aaKnown RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 ZNF248Q8NDW4 579 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 CSNK2A3Q8NEV1 391 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 RNF133Q8WVZ7 376 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ADIPOR1Q96A54 375 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 TMEM59Q9BXS4 323 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 LSM5Q9Y4Y9 91 aaKnown RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 BLACEA4D250 179 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 SCGB1D2O95969 90 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 IGHV2-5P01817 119 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 GSTP1P09211 210 aaKnown RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 TMEM33P57088 247 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 LCN10Q6JVE6 187 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 OR9K2Q8NGE7 335 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ADAMTS18Q8TE60 1221 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ZNF285Q96NJ3 590 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 EIF5A2Q9GZV4 153 aaKnown RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 MEMO1Q9Y316 297 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 KIR2DS5A0A0G2JLQ3 304 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 A0A0G2JNG1 304 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 A0A1W2PPE2 198 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 CEACAM18A8MTB9 384 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 KIR2DS3K7RE56 304 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 LAP3P28838 519 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 POU3F1Q03052 451 aaPredicted RBP12.37□□□□□ -0.43
APOB-202ENST00000399256 PLCXD2Q0VAA5 305 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 KIR2DS5Q14953 304 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 DNM1P34Q6PK57 102 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 OR10H5Q8NGA6 315 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 SLC22A8Q8TCC7 542 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ASB10Q8WXI3 467 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 C11orf40Q8WZ69 217 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 FGF14Q92915 247 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 EMC6Q9BV81 110 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 CNTNAP3Q9BZ76 1288 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 ANAPC10Q9UM13 185 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 SRPK3Q9UPE1 567 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 OSGIN2Q9Y236 505 aa12.37□□□□□ -0.43
APOB-202ENST00000399256 A0A1B0GV50 99 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 MED19A0JLT2 244 aaPredicted RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 MS4A18H0YCH9 400 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 PTGER4P35408 488 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 FHITP49789 147 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 GUK1Q16774 197 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 MS4A18Q3C1V0 323 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 ARL5BQ96KC2 179 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 C1orf147Q96MC9 270 aaPredicted RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 SCGB3A2Q96PL1 93 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 GABRG3Q99928 467 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 MTCH2Q9Y6C9 303 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 HCKP08631 526 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 ANOS1P23352 680 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 EIF2S3P41091 472 aaKnown RBP12.36□□□□□ -0.43
APOB-202ENST00000399256 OR1D4P47884 311 aa12.36□□□□□ -0.43
APOB-202ENST00000399256 SNU13P55769 128 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms