RNA–Protein interactions for RNA: ENST00000398529.7

RAB1A-201, Transcript of RAB1A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB1A, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-201ENST00000398529 GCM1Q9NP62 436 aa11.97□□□□□ -0.49
RAB1A-201ENST00000398529 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
RAB1A-201ENST00000398529 WARS2Q9UGM6 360 aaKnown RBP11.97□□□□□ -0.49
RAB1A-201ENST00000398529 LHFPL6Q9Y693 200 aa11.97□□□□□ -0.49
RAB1A-201ENST00000398529 MDFIC2A0A1B0GVS7 189 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 ZNF593O00488 134 aaPredicted RBP11.96□□□□□ -0.49
RAB1A-201ENST00000398529 SELENOFO60613 162 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 COX5BP10606 129 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 PSKH1P11801 424 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 HTR1FP30939 366 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 HTR5AP47898 357 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 MMP16P51512 607 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 RPL15P61313 204 aaKnown RBP11.96□□□□□ -0.49
RAB1A-201ENST00000398529 TMED1Q13445 227 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 TEX30Q5JUR7 227 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 BRD3OSQ6XYD6 125 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 LINC00346Q8IVM7 164 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 TIGD4Q8IY51 512 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 OR5L1Q8NGL2 311 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 OR6N2Q8NGY6 317 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 OR13G1Q8NGZ3 307 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 RFKQ969G6 155 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 HAVCR1Q96D42 359 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 Q96MT0 163 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 SIGLEC11Q96RL6 698 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.49
RAB1A-201ENST00000398529 NUDT16L1Q9BRJ7 211 aaKnown RBP11.96□□□□□ -0.49
RAB1A-201ENST00000398529 CDADC1Q9BWV3 514 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 TMEM165Q9HC07 324 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 HAO2Q9NYQ3 351 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 ASH2LQ9UBL3 628 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 CLN8Q9UBY8 286 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 RAB26Q9ULW5 256 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.49
RAB1A-201ENST00000398529 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
RAB1A-201ENST00000398529 SNTNA6NMZ2 147 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 DOK2O60496 412 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 WBP4O75554 376 aaKnown RBP11.95□□□□□ -0.5
RAB1A-201ENST00000398529 SPARCP09486 303 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 NAA10P41227 235 aaPredicted RBP11.95□□□□□ -0.5
RAB1A-201ENST00000398529 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
RAB1A-201ENST00000398529 PITPNBP48739 271 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 HIST1H3AP68431 136 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 HLXQ14774 488 aaPredicted RBP11.95□□□□□ -0.5
RAB1A-201ENST00000398529 TAF9Q16594 264 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 PCK2Q16822 640 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 HIST2H3PS2Q5TEC6 136 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 SLC18B1Q6NT16 456 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 CORO6Q6QEF8 472 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 Q6YL49 198 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 HIST2H3AQ71DI3 136 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 THAP5Q7Z6K1 395 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 GJC3Q8NFK1 279 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 OR2AJ1Q8NGZ0 328 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 CNIH3Q8TBE1 160 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 SSMEM1Q8WWF3 244 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 PRDM13Q9H4Q3 707 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 C1RLQ9NZP8 487 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 CYB5R1Q9UHQ9 305 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.95□□□□□ -0.5
RAB1A-201ENST00000398529 RNF114Q9Y508 228 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 POMT1Q9Y6A1 747 aa11.95□□□□□ -0.5
RAB1A-201ENST00000398529 RER1O15258 196 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 SGCEO43556 437 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 ZNF205O95201 554 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 MRPL3P09001 348 aaKnown RBP11.94□□□□□ -0.5
RAB1A-201ENST00000398529 RAC2P15153 192 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 MYF6P23409 242 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 FGF12P61328 243 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 PAX2Q02962 417 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 POU4F2Q12837 409 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 HNRNPA0Q13151 305 aaKnown RBP11.94□□□□□ -0.5
RAB1A-201ENST00000398529 CCDC92Q53HC0 331 aaPredicted RBP11.94□□□□□ -0.5
RAB1A-201ENST00000398529 CD276Q5ZPR3 534 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 Q6ZR03 302 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 SHFQ7M4L6 423 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 SLC16A9Q7RTY1 509 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 DPY19L4Q7Z388 723 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 OR51G2Q8NGK0 314 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 FBLIM1Q8WUP2 373 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 DYRK2Q92630 601 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 CNN2Q99439 309 aaKnown RBP11.94□□□□□ -0.5
RAB1A-201ENST00000398529 PCGF1Q9BSM1 259 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 ANKRD60Q9BZ19 345 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 CHIAQ9BZP6 476 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 YIPF3Q9GZM5 350 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 ADGRL4Q9HBW9 690 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 TCF7L1Q9HCS4 588 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 STARD10Q9Y365 291 aa11.94□□□□□ -0.5
RAB1A-201ENST00000398529 ENSAO43768 121 aaKnown RBP11.93□□□□□ -0.5
RAB1A-201ENST00000398529 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
RAB1A-201ENST00000398529 DBTP11182 482 aaKnown RBP11.93□□□□□ -0.5
RAB1A-201ENST00000398529 RGS6P49758 472 aa11.93□□□□□ -0.5
RAB1A-201ENST00000398529 ZNF91Q05481 1191 aa11.93□□□□□ -0.5
RAB1A-201ENST00000398529 EIF2B1Q14232 305 aaKnown RBP11.93□□□□□ -0.5
RAB1A-201ENST00000398529 SMN1Q16637 294 aaKnown RBP11.93□□□□□ -0.5
RAB1A-201ENST00000398529 CFAP77Q6ZQR2 320 aa11.93□□□□□ -0.5
RAB1A-201ENST00000398529 DCXRQ7Z4W1 244 aa11.93□□□□□ -0.5
RAB1A-201ENST00000398529 OR5AS1Q8N127 324 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms