RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 CSF3P09919 207 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 ACKR3P25106 362 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 MAGEB1P43366 347 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 OR8B8Q15620 311 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 TSTQ16762 297 aaKnown RBP21.58■■□□□ 1.05
U2AF1-203ENST00000398137 KLBQ86Z14 1044 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 EGFL6Q8IUX8 553 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 OR10AD1Q8NGE0 317 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 GATAD2BQ8WXI9 593 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 SLC30A2Q9BRI3 323 aa21.58■■□□□ 1.05
U2AF1-203ENST00000398137 MALRD1Q5VYJ5 2156 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 H3BSH0 61 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 NCR1O76036 304 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 MT-ND2P03891 347 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 IGHV4-31P0DP07 118 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 EEF1B2P24534 225 aaKnown RBP21.57■■□□□ 1.04
U2AF1-203ENST00000398137 GTF2A1P52655 376 aaPredicted RBP21.57■■□□□ 1.04
U2AF1-203ENST00000398137 MRPL28Q13084 256 aaKnown RBP21.57■■□□□ 1.04
U2AF1-203ENST00000398137 ALKBH1Q13686 389 aaKnown RBP21.57■■□□□ 1.04
U2AF1-203ENST00000398137 XAF1Q6GPH4 301 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 OR2Z1Q8NG97 314 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 ELMOD3Q96FG2 381 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 CDCA4Q9BXL8 241 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 CCDC90BQ9GZT6 254 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 ERGIC3Q9Y282 383 aa21.57■■□□□ 1.04
U2AF1-203ENST00000398137 A0A1B0GTI1 187 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 A0A1B0GVI7 797 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 LOC107986453A0A1B0GWG9 222 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 A8MV72 311 aaPredicted RBP21.56■■□□□ 1.04
U2AF1-203ENST00000398137 CA6P23280 308 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 DDOSTP39656 456 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 CCL8P80075 99 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 PCGF3Q3KNV8 242 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 ZNF485Q8NCK3 441 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 OR13G1Q8NGZ3 307 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 TMEM100Q9NV29 134 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 MRPL15Q9P015 296 aaKnown RBP21.56■■□□□ 1.04
U2AF1-203ENST00000398137 ZDHHC8Q9ULC8 765 aa21.56■■□□□ 1.04
U2AF1-203ENST00000398137 OR4C45A6NMZ5 311 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 H0YL77 283 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 MLNRO43193 412 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 TPD52L2O43399 206 aaKnown RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 LALBAP00709 142 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 HLA-DPB1P04440 258 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 UBCP0CG48 685 aaKnown RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 USF1P22415 310 aaPredicted RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 NR4A2P43354 598 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 TGM4P49221 684 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 PDLIM4P50479 330 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 CCR9P51686 369 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 WNT4P56705 351 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 DOC2BQ14184 412 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 IRF3Q14653 427 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 RNLSQ5VYX0 342 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 RDH10Q8IZV5 341 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 NANOGP1Q8N7R0 232 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 HAVCR2Q8TDQ0 301 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 NEU4Q8WWR8 484 aaPredicted RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 DVL3Q92997 716 aaPredicted RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 ADAT1Q9BUB4 502 aaKnown RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 PAPOLGQ9BWT3 736 aaKnown RBP21.55■■□□□ 1.04
U2AF1-203ENST00000398137 MND1Q9BWT6 205 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 TRIM36Q9NQ86 728 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 BABAM2Q9NXR7 383 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 RHBDD3Q9Y3P4 386 aa21.55■■□□□ 1.04
U2AF1-203ENST00000398137 ANKRD30BLA7E2S9 258 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 SYT7O43581 403 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 DHRS3O75911 302 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 ADH4P08319 380 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 CCL1P22362 96 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 MAP2K3P46734 347 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 GABARAPL2P60520 117 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 TNFAIP6P98066 277 aaPredicted RBP21.54■■□□□ 1.04
U2AF1-203ENST00000398137 DOK3Q7L591 496 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 ZNF676Q8N7Q3 588 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 CSNK2A3Q8NEV1 391 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 SEMA6DQ8NFY4 1073 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 DIRC2Q96SL1 478 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 DECR2Q9NUI1 292 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 NKIRAS2Q9NYR9 191 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 LRRC42Q9Y546 428 aa21.54■■□□□ 1.04
U2AF1-203ENST00000398137 IGHV4-61A0A0C4DH41 118 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 LOC390937A0A1W2PQ73 354 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 MTRF1O75570 445 aaKnown RBP21.53■■□□□ 1.04
U2AF1-203ENST00000398137 HPXP02790 462 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 ATP6V1B1P15313 513 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 FAHP16930 419 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 TNFSF4P23510 183 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 CDK5R1Q15078 307 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 OR8G1Q15617 311 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 SPRNQ5BIV9 151 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 FAM209AQ5JX71 171 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 PRSS48Q7RTY5 328 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 ZFP41Q8N8Y5 198 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 PLPP7Q8NBV4 271 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 PPP1R3EQ9H7J1 279 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 SIRT4Q9Y6E7 314 aaPredicted RBP21.53■■□□□ 1.04
U2AF1-203ENST00000398137 V9GYS6 101 aa21.53■■□□□ 1.04
U2AF1-203ENST00000398137 TRBV2A0A0J9YWF9 115 aa21.52■■□□□ 1.04
U2AF1-203ENST00000398137 A0A1B0GWJ7 208 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms