RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, human

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-205	ENST00000397370	NANOS3	P60323	173 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	MRPL28	Q13084	256 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	MAB21L1	Q13394	359 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	MED21	Q13503	144 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	ALKBH1	Q13686	389 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	ODF4	Q2M2E3	257 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	HFE	Q30201	348 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	OR2G6	Q5TZ20	316 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	TMPRSS11A	Q6ZMR5	421 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370		Q6ZSR3	168 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	CIART	Q8N365	385 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	STX19	Q8N4C7	294 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	FTMT	Q8N4E7	242 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	KLHL36	Q8N4N3	616 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	SEMA6D	Q8NFY4	1073 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	OR14K1	Q8NGZ2	314 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	PAPOLG	Q9BWT3	736 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	REG4	Q9BYZ8	158 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	RASSF4	Q9H2L5	321 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	PPP1R3E	Q9H7J1	279 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	CHCHD3	Q9NX63	227 aa	Known RBP	13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	SCN3B	Q9NY72	215 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370		V9GYS6	101 aa		13.65	□□□□□ -0.22
RBM39-205	ENST00000397370	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM39-205	ENST00000397370		A0A1B0GVI7	797 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370		E9PI62	339 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	CCDC159	P0C7I6	412 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	UBC	P0CG48	685 aa	Known RBP	13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	CD99	P14209	185 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	C21orf33	P30042	268 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	GNAL	P38405	381 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	CCR9	P51686	369 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	GBX2	P52951	348 aa	Predicted RBP	13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	TMEM33	P57088	247 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	RIPPLY1	Q0D2K3	151 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	DOK3	Q7L591	496 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	KRT74	Q7RTS7	529 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	CELF2-AS1	Q8N7Q2	184 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	SPERT	Q8NA61	448 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	HAVCR2	Q8TDQ0	301 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	PIGC	Q92535	297 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	CCL17	Q92583	94 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	BPESC1	Q9GZL8	116 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	GCM1	Q9NP62	436 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	PIGL	Q9Y2B2	252 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	PCDHGB5	Q9Y5G0	923 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370	MPC1	Q9Y5U8	109 aa		13.64	□□□□□ -0.23
RBM39-205	ENST00000397370		A0A096LNT2	108 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	IGHV3-64D	A0A0J9YX35	117 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	OR4C45	A6NMZ5	311 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	ZNF850	A8MQ14	1090 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	PTGES3L	E9PB15	166 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	SYT7	O43581	403 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	CDK1	P06493	297 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	GATA4	P43694	442 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	MZT1	Q08AG7	82 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	PRDX4	Q13162	271 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	ZBTB37	Q5TC79	503 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	TMEM244	Q5VVB8	128 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	RDH10	Q8IZV5	341 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	OR8S1	Q8NH09	359 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	OR52N1	Q8NH53	320 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	COX4I2	Q96KJ9	171 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370		Q9H521	79 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	ABCB9	Q9NP78	766 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	PPP1R3C	Q9UQK1	317 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	TPRKB	Q9Y3C4	175 aa		13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.63	□□□□□ -0.23
RBM39-205	ENST00000397370	CELSR1	Q9NYQ6	3014 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	LOC100289279	A0A1B0GTE1	492 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	DHRS7C	A6NNS2	312 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	CLDN25	C9JDP6	229 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370		H3BSH0	61 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	SMAD7	O15105	426 aa	Known RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	PPIH	O43447	177 aa	Known RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	DENR	O43583	198 aa	Known RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	PTBP3	O95758	552 aa	Known RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	ISG15	P05161	165 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	FAH	P16930	419 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	GPR6	P46095	362 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	TGM4	P49221	684 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	GTF2A1	P52655	376 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	SLC35A2	P78381	396 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	HNRNPA0	Q13151	305 aa	Known RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	PRAMEF6	Q5VXH4	476 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	MOGAT3	Q86VF5	341 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	ZNF485	Q8NCK3	441 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	CCDC54	Q8NEL0	328 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	GATAD2B	Q8WXI9	593 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	SGCD	Q92629	289 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	MYDGF	Q969H8	173 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	ITPKC	Q96DU7	683 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	C18orf12	Q96KH6	178 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	TMEM106B	Q9NUM4	274 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	C14orf119	Q9NWQ9	140 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	DCAF16	Q9NXF7	216 aa		13.62	□□□□□ -0.23
RBM39-205	ENST00000397370	BABAM2	Q9NXR7	383 aa		13.62	□□□□□ -0.23

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