RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 HNF1AP20823 631 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 GADD45AP24522 165 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 IL2RGP31785 369 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 VBP1P61758 197 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 KLHL12Q53G59 568 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 DCXRQ7Z4W1 244 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 PEG10Q86TG7 708 aaKnown RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 TIGD4Q8IY51 512 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF511Q8NB15 262 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF485Q8NCK3 441 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OR8G5Q8NG78 346 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OR2Z1Q8NG97 314 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OR13G1Q8NGZ3 307 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 MRPL48Q96GC5 212 aaKnown RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 SOX7Q9BT81 388 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 MMP27Q9H306 513 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 WDR76Q9H967 626 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 PALMDQ9NP74 551 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ERVK13-1Q9NX77 482 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 IL19Q9UHD0 177 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 STUB1Q9UNE7 303 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 IQCF6A8MYZ5 107 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 SBK2P0C263 348 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 FAM157CP0CG43 387 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 RPS27P42677 84 aaKnown RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 GALEQ14376 348 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 TAF13Q15543 124 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 SSX1Q16384 188 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OR2T2Q6IF00 324 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 LYPD4Q6UWN0 246 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 DRAM2Q6UX65 266 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 Q6ZR03 302 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 SHFQ7M4L6 423 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 PHC2Q8IXK0 858 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 OR10S1Q8NGN2 331 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 UFD1Q92890 307 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZMYND19Q96E35 227 aaPredicted RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF649Q9BS31 505 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 DCSTAMPQ9H295 470 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 NARFLQ9H6Q4 476 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 CCDC59Q9P031 241 aaKnown RBP12.34□□□□□ -0.43
SEC13-208ENST00000397109 SSR3Q9UNL2 185 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 WIPI2Q9Y4P8 454 aa12.34□□□□□ -0.43
SEC13-208ENST00000397109 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 IFNL4K9M1U5 179 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 SOX6P35712 828 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 SLC6A9P48067 706 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 DVL1P1P54792 670 aaPredicted RBP12.33□□□□□ -0.44
SEC13-208ENST00000397109 TAS2R43P59537 309 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 LMO4P61968 165 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 RPS7P62081 194 aaKnown RBP12.33□□□□□ -0.44
SEC13-208ENST00000397109 NCS1P62166 190 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 OR5AS1Q8N127 324 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 HAVCR2Q8TDQ0 301 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 RAB39BQ96DA2 213 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 SLAMF6Q96DU3 332 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 INTS14Q96SY0 518 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 CENPMQ9NSP4 180 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 TREM2Q9NZC2 230 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 CACNG2Q9Y698 323 aa12.33□□□□□ -0.44
SEC13-208ENST00000397109 DYSFO75923 2080 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 WNT9BO14905 357 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 OR2T7P0C7T2 308 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 FGF9P31371 208 aaPredicted RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 GABRA5P31644 462 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 GRB2P62993 217 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 GK2Q14410 553 aaPredicted RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 TRAM1Q15629 374 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 FAM120AOSQ5T036 256 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 AVPI1Q5T686 147 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 PGAP1Q75T13 922 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 SLC16A9Q7RTY1 509 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 NAA40Q86UY6 237 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 GLCCI1Q86VQ1 547 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 OR51G2Q8NGK0 314 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 OR6N2Q8NGY6 317 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 OR2T27Q8NH04 317 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 ST7LQ8TDW4 575 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 BORCS5Q969J3 196 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 CNN2Q99439 309 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 KCNJ15Q99712 375 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 SLC30A2Q9BRI3 323 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 WDR12Q9GZL7 423 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 SLIRPQ9GZT3 109 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 ADGRL4Q9HBW9 690 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 HMG20AQ9NP66 347 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 TMEM100Q9NV29 134 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 BABAM2Q9NXR7 383 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 GSTK1Q9Y2Q3 226 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 NOP16Q9Y3C1 178 aaKnown RBP12.32□□□□□ -0.44
SEC13-208ENST00000397109 TANC2Q9HCD6 1990 aa12.32□□□□□ -0.44
SEC13-208ENST00000397109 DAPL1A0PJW8 107 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms