RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 RGS6P49758 472 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM33P57088 247 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 HIST1H3AP68431 136 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 PLP2Q04941 152 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 GPR50Q13585 617 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 TSTQ16762 297 aaKnown RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 NKPD1Q17RQ9 610 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF829Q3KNS6 432 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 HIST2H3PS2Q5TEC6 136 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 RGS7BPQ6MZT1 257 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 FAHD2BQ6P2I3 314 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 RPL22L1Q6P5R6 122 aaKnown RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 HIST2H3AQ71DI3 136 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 CPEB3Q8NE35 698 aaKnown RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 SPTSSAQ969W0 71 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 TMIGD2Q96BF3 282 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 PELI1Q96FA3 418 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 FAHD2AQ96GK7 314 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 KCNJ15Q99712 375 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 OR2H1Q9GZK4 316 aa8.77□□□□□ -1.01
NEDD8-202ENST00000396828 DDX28Q9NUL7 540 aaKnown RBP8.77□□□□□ -1.01
NEDD8-202ENST00000396828 LOC105371242A0A075B767 164 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 TRBV2A0A0J9YWF9 115 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 IQCMA0A1B0GVH7 501 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PRR32B1ATL7 298 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PLPP2O43688 288 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 ABHD16AO95870 558 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 MMP7P09237 267 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 CD36P16671 472 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 ADRA2CP18825 462 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 LIPAP38571 399 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PSMB10P40306 273 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 GTF2A1P52655 376 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 RPS23P62266 143 aaKnown RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PSG4Q00888 419 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 TPBGQ13641 420 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 TRAM1Q15629 374 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 TIMM50Q3ZCQ8 353 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 CCDC92Q53HC0 331 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 SPRNQ5BIV9 151 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PABPC1L2AQ5JQF8 200 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 GPR107Q5VW38 600 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 LIPKQ5VXJ0 399 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 CLVS1Q8IUQ0 354 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 OR1F12Q8NHA8 337 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 SYNPRQ8TBG9 265 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 COQ7Q99807 217 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 FUNDC2Q9BWH2 189 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 FAM192AQ9GZU8 254 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 COMMD4Q9H0A8 199 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PNRC2Q9NPJ4 139 aaKnown RBP8.76□□□□□ -1.01
NEDD8-202ENST00000396828 G6PC2Q9NQR9 355 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 NDUFB11Q9NX14 153 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 FBXL3Q9UKT7 428 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 GTF2A1LQ9UNN4 478 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 WNK2Q9Y3S1 2297 aa8.76□□□□□ -1.01
NEDD8-202ENST00000396828 PNMA8CA0A1B0GUJ8 204 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 TMEM269A0A1B0GVZ9 245 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 OR6C6A6NF89 314 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 E9PI62 339 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 LOC110117498-PIK3R3F6TDL0 507 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 OGG1O15527 345 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 LALBAP00709 142 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 CD1AP06126 327 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 COX5BP10606 129 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 GABRA5P31644 462 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 WNT5AP41221 380 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 CRYBB2P43320 205 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 HTR5AP47898 357 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 CX3CR1P49238 355 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 GDI2P50395 445 aaKnown RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 MMP16P51512 607 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 UCP2P55851 309 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 KLF3P57682 345 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 PSMA6P60900 246 aaKnown RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 MRPS11P82912 194 aaKnown RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ALKBH1Q13686 389 aaKnown RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 CDK5R1Q15078 307 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 SPATA46Q5T0L3 261 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 DMKNQ6E0U4 476 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF774Q6NX45 483 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 FDX2Q6P4F2 183 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ARL9Q6T311 187 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 C12orf54Q6X4T0 127 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF101Q8IZC7 436 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF283Q8N7M2 679 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZFP41Q8N8Y5 198 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 OR10S1Q8NGN2 331 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 OR51F2Q8NH61 342 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 AKR7LQ8NHP1 331 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF420Q8TAQ5 688 aaPredicted RBP8.75□□□□□ -1.01
NEDD8-202ENST00000396828 SMIM19Q96E16 107 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 YIPF6Q96EC8 236 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 TMPRSS13Q9BYE2 586 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 WNT5BQ9H1J7 359 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ZNF665Q9H7R5 613 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 MOB1AQ9H8S9 216 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 SP140LQ9H930 580 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 ATPIF1Q9UII2 106 aa8.75□□□□□ -1.01
NEDD8-202ENST00000396828 GRIP1Q9Y3R0 1128 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms