RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CHST2Q9Y4C5 530 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 CDK5RAP2Q96SN8 1893 aa14.02□□□□□ -0.17
GNE-202ENST00000396594 PLPP3O14495 311 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 EPPINO95925 133 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 CTGFP29279 349 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 KIR2DL1P43626 348 aaPredicted RBP14.01□□□□□ -0.17
GNE-202ENST00000396594 HAAOP46952 286 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 FABP5Q01469 135 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 VN1R4Q7Z5H5 301 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 LINC01555Q8NAE3 123 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 PURGQ9UJV8 347 aaKnown RBP14.01□□□□□ -0.17
GNE-202ENST00000396594 FBXL2Q9UKC9 423 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 IGHA2P01877 340 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 SSTP61278 116 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 PHLDA2Q53GA4 152 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 RAB1CQ92928 201 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 ZNF331Q9NQX6 463 aaPredicted RBP14.01□□□□□ -0.17
GNE-202ENST00000396594 HS3ST1O14792 307 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 LIPCP11150 499 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 ZBTB25P24278 435 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 OR2B8PP59922 312 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 ENDOGQ14249 297 aaKnown RBP14.01□□□□□ -0.17
GNE-202ENST00000396594 OR10K2Q6IF99 312 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 GPR119Q8TDV5 335 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 SPNS1Q9H2V7 528 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 BANF2Q9H503 90 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 MED29Q9NX70 200 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 IGHV5-51A0A0C4DH38 117 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 RPS2P15880 293 aaKnown RBP14.01□□□□□ -0.17
GNE-202ENST00000396594 AVPI1Q5T686 147 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 TMEM92Q6UXU6 159 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 CHRNA10Q9GZZ6 450 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 THYN1Q9P016 225 aa14.01□□□□□ -0.17
GNE-202ENST00000396594 ZNF705FA8MVS1 300 aaPredicted RBP14□□□□□ -0.17
GNE-202ENST00000396594 ZNF705DP0CH99 300 aaPredicted RBP14□□□□□ -0.17
GNE-202ENST00000396594 ZNF705BP0CI00 300 aaPredicted RBP14□□□□□ -0.17
GNE-202ENST00000396594 RRASP10301 218 aa14□□□□□ -0.17
GNE-202ENST00000396594 SLC25A26Q70HW3 274 aa14□□□□□ -0.17
GNE-202ENST00000396594 RBPMSQ93062 196 aaKnown RBP14□□□□□ -0.17
GNE-202ENST00000396594 IKZF5Q9H5V7 419 aa14□□□□□ -0.17
GNE-202ENST00000396594 SIRPB1O00241 398 aa14□□□□□ -0.17
GNE-202ENST00000396594 KLK10O43240 276 aa14□□□□□ -0.17
GNE-202ENST00000396594 OR4E1P0C645 316 aa14□□□□□ -0.17
GNE-202ENST00000396594 COL9A1P20849 921 aa14□□□□□ -0.17
GNE-202ENST00000396594 HIST2H3PS2Q5TEC6 136 aa14□□□□□ -0.17
GNE-202ENST00000396594 MITD1Q8WV92 249 aa14□□□□□ -0.17
GNE-202ENST00000396594 TRMT61AQ96FX7 289 aaKnown RBP14□□□□□ -0.17
GNE-202ENST00000396594 SCN9AQ15858 1988 aa14□□□□□ -0.17
GNE-202ENST00000396594 LTC4SQ16873 150 aa14□□□□□ -0.17
GNE-202ENST00000396594 ARSGQ96EG1 525 aa14□□□□□ -0.17
GNE-202ENST00000396594 MYO18AQ92614 2054 aaKnown RBP14□□□□□ -0.17
GNE-202ENST00000396594 SHANK3Q9BYB0 1731 aa14□□□□□ -0.17
GNE-202ENST00000396594 CTSVO60911 334 aa14□□□□□ -0.17
GNE-202ENST00000396594 PRSS23O95084 383 aa14□□□□□ -0.17
GNE-202ENST00000396594 B4GALT1P15291 398 aa14□□□□□ -0.17
GNE-202ENST00000396594 FCGR2CP31995 323 aa14□□□□□ -0.17
GNE-202ENST00000396594 RPS16P62249 146 aaKnown RBP14□□□□□ -0.17
GNE-202ENST00000396594 TMEM215Q68D42 235 aa14□□□□□ -0.17
GNE-202ENST00000396594 BTNL8Q6UX41 500 aa14□□□□□ -0.17
GNE-202ENST00000396594 GRAMD2BQ96HH9 432 aa14□□□□□ -0.17
GNE-202ENST00000396594 AKIP1Q9NQ31 210 aa14□□□□□ -0.17
GNE-202ENST00000396594 PLXNB2O15031 1838 aa14□□□□□ -0.17
GNE-202ENST00000396594 RPL12P30050 165 aaKnown RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 DCTDP32321 178 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 KLF3P57682 345 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 HABP2Q14520 560 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 HFEQ30201 348 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 INO80CQ6PI98 192 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 C19orf35Q6ZS72 473 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 HES7Q9BYE0 225 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 HES4Q9HCC6 221 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 TMIGD3P0DMS9 266 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 ZP4Q12836 540 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 IL34Q6ZMJ4 242 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 BTLAQ7Z6A9 289 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 OR5AS1Q8N127 324 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 OR5M1Q8NGP8 315 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 ASB10Q8WXI3 467 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 EXTL1Q92935 676 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 PTP4A1Q93096 173 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 CLDN23Q96B33 292 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 AUNIPQ9H7T9 357 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 TCFL5Q9UL49 500 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 FOCADQ5VW36 1801 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 HOXD11P31277 338 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 CT55Q8WUE5 264 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 RTN4IP1Q8WWV3 396 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 GABRA6Q16445 453 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 ZBTB37Q5TC79 503 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 HES3Q5TGS1 186 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 CCDC190Q86UF4 302 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 NFAM1Q8NET5 270 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 KTI12Q96EK9 354 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 CDX2Q99626 313 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 PRR14Q9BWN1 585 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 CSAG2Q9Y5P2 127 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 TRAV38-1A0A0B4J264 116 aa13.99□□□□□ -0.17
GNE-202ENST00000396594 TRAF3IP2O43734 574 aaPredicted RBP13.99□□□□□ -0.17
GNE-202ENST00000396594 PCSK6P29122 969 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms