RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TMPRSS11FQ6ZWK6 438 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MS4A10Q96PG2 267 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 SIT1Q9Y3P8 196 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 TGFBR1P36897 503 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 CAMKMTQ7Z624 323 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MZB1Q8WU39 189 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 DUS3LQ96G46 650 aaKnown RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 SLC35B3Q9H1N7 401 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 HES4Q9HCC6 221 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 KIAA1324LA8MWY0 1029 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 SULT1A2P50226 295 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 NKAIN1Q4KMZ8 207 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 PRSS42Q7Z5A4 293 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MOB3AQ96BX8 217 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 A0A1W2PR48 441 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 FAM3AP98173 230 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 SHBQ15464 509 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 LBHQ53QV2 105 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 GLDNQ6ZMI3 551 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 NXPE3Q969Y0 559 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 C1QTNF6Q9BXI9 259 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 DUSP21Q9H596 190 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 CCL26Q9Y258 94 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 OR52N5Q8NH56 324 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 OR5V1Q9UGF6 321 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 FOXJ3Q9UPW0 622 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 FAM24AA6NFZ4 105 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 M0R1B8 84 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 PSMB2P49721 201 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 FZD2Q14332 565 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 TUSC1Q2TAM9 212 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MAP6Q96JE9 813 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 SCN1AP35498 2009 aa12.64□□□□□ -0.39
COL4A3-202ENST00000396578 MAP1BP46821 2468 aaKnown RBP12.64□□□□□ -0.39
COL4A3-202ENST00000396578 HSF5Q4G112 596 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM207Q6UWW9 146 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 GPR137Q96N19 417 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 POMT2Q9UKY4 750 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 CRYBG1Q9Y4K1 1723 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 A0A096LPE4 126 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 A0A1W2PPZ6 126 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 NRG2O14511 850 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 ICOSLGO75144 302 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM52BQ4KMG9 183 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 RPS19BP1Q86WX3 136 aaKnown RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 GMLQ99445 158 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 RGS13O14921 159 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 CST7O76096 145 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 OR2G2Q8NGZ5 317 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 ATOH1Q92858 354 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 PELI1Q96FA3 418 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 CYB5R1Q9UHQ9 305 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 NUMBLQ9Y6R0 609 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 IGHV3-64DA0A0J9YX35 117 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 FUT6P51993 359 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM241Q24JQ0 296 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TAAR9Q96RI9 348 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 FGF20Q9NP95 211 aaPredicted RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 A0A1B0GTW7 788 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 H3BP45 60 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
COL4A3-202ENST00000396578 FAM157BP0CG42 384 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 SIRT6Q8N6T7 355 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 PRSS3P2Q8NHM4 247 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TTC9Q92623 222 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 M0R143 59 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 FCN1O00602 326 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 SLC25A26Q70HW3 274 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 ZDHHC22Q8N966 263 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 SLC37A2Q8TED4 501 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 ZDHHC5Q9C0B5 715 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 HCFC2Q9Y5Z7 792 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 TRGV10A0A0A0MS01 117 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 B3GALT4O96024 378 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 LINC00303Q3SY05 128 aa12.63□□□□□ -0.39
COL4A3-202ENST00000396578 LOC102724200A0A096LPH7 203 aaPredicted RBP12.62□□□□□ -0.39
COL4A3-202ENST00000396578 MBTPS2O43462 519 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 NARFLQ9H6Q4 476 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 H0YIG0 161 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 GOSR1O95249 250 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 CST4P01036 141 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 SPNP16150 400 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 ZBTB25P24278 435 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 CD200P41217 278 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 DERL3Q96Q80 235 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 PCED1AQ9H1Q7 454 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 SLC2A9Q9NRM0 540 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 TMEM202A6NGA9 273 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 WDR73Q6P4I2 378 aa12.62□□□□□ -0.39
COL4A3-202ENST00000396578 ARRDC1Q8N5I2 433 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms