RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PSG4Q00888 419 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 HGFACQ04756 655 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 MEF2DQ14814 521 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 TGIF1Q15583 401 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 STK11Q15831 433 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 NPRL2Q8WTW4 380 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 SGK3Q96BR1 496 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 REEP6Q96HR9 211 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 URM1Q9BTM9 101 aaKnown RBP13.07□□□□□ -0.32
CBX3-202ENST00000396386 IFT46Q9NQC8 304 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 ZNF224Q9NZL3 707 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 GHRLQ9UBU3 117 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 SCP2D1Q9UJQ7 156 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 AHCTF1Q8WYP5 2266 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
CBX3-202ENST00000396386 UBE2QL1A1L167 161 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 OR6C65A6NJZ3 312 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 CRTAPO75718 401 aaPredicted RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 ACTL6AO96019 429 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 LCATP04180 440 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 VSIG10L2P0DP72 767 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ARG2P78540 354 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 KISS1Q15726 138 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 UBE2V2Q15819 145 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 Q5BKY6 102 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 SKA3Q8IX90 412 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 FAM109AQ8N4B1 249 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 C9orf62Q8N4C0 152 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 SPICQ8N5J4 248 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ZFP62Q8NB50 900 aaPredicted RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 TMEM104Q8NE00 496 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 SEMA6DQ8NFY4 1073 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 NUDCD2Q8WVJ2 157 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 NICN1Q9BSH3 213 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 GON7Q9BXV9 100 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 PRRG4Q9BZD6 226 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 CST11Q9H112 138 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 DLL4Q9NR61 685 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 MGAT4CQ9UBM8 478 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ZNF391Q9UJN7 358 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 HSPB11Q9Y547 144 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 A0A0A6YYD4 124 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 IGHV3-9P01782 118 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ITGB2P05107 769 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 GSTP1P09211 210 aaKnown RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 PATE4P0C8F1 98 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 GNB3P16520 340 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ALDH3B1P43353 468 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 IDO2Q6ZQW0 420 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 TMEM178AQ8NBL3 297 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 OR2AE1Q8NHA4 323 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 ZNF431Q8TF32 576 aaPredicted RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
CBX3-202ENST00000396386 SELENOIQ9C0D9 397 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 BANF2Q9H503 90 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 BCO1Q9HAY6 547 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 DMXL1Q9Y485 3027 aa13.06□□□□□ -0.32
CBX3-202ENST00000396386 MED13Q9UHV7 2174 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 GVINP1Q7Z2Y8 2422 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ZNF724A8MTY0 619 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ZNF587BE7ETH6 402 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
CBX3-202ENST00000396386 FCGR2AP12318 317 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 PTGFRP43088 359 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 SOX8P57073 446 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 GNG2P59768 71 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ZMYND11Q15326 602 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 RNASE10Q5GAN6 216 aaKnown RBP13.05□□□□□ -0.32
CBX3-202ENST00000396386 ZNF766Q5HY98 468 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 LAMTOR1Q6IAA8 161 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 TMEM53Q6P2H8 277 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.05□□□□□ -0.32
CBX3-202ENST00000396386 VASH2Q86V25 355 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 TUSC5Q8IXB3 177 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 BPIFB2Q8N4F0 458 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 OR5D18Q8NGL1 313 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 FGFBP3Q8TAT2 258 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 FNDC9Q8TBE3 224 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 CCDC107Q8WV48 283 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 TNFAIP8L1Q8WVP5 186 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 RAB3CQ96E17 227 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 RGCCQ9H4X1 137 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 CALHM2Q9HA72 323 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ACKR4Q9NPB9 350 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ASCL3Q9NQ33 180 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 ATPIF1Q9UII2 106 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 MGAT4AQ9UM21 535 aa13.05□□□□□ -0.32
CBX3-202ENST00000396386 RPL36A-HNRNPH2H7BZ11 118 aa13.04□□□□□ -0.32
CBX3-202ENST00000396386 ZNF735P0CB33 412 aa13.04□□□□□ -0.32
CBX3-202ENST00000396386 LIPCP11150 499 aa13.04□□□□□ -0.32
CBX3-202ENST00000396386 HIST1H1DP16402 221 aaKnown RBP13.04□□□□□ -0.32
CBX3-202ENST00000396386 ZNF24P17028 368 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms