RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GFRALQ6UXV0 394 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 SLC25A26Q70HW3 274 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 C14orf79Q96F83 325 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 C2orf50Q96LR7 162 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM56Q96MV1 263 aa4.92□□□□□ -1.62
VPS13C-204ENST00000395898 TRAV17A0A0B4J275 112 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 M0QZ24 198 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CXCL13O43927 109 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PDGFBP01127 241 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR5G3P0C626 314 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PGA3P0DJD8 388 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR5H8P0DN80 308 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PGFP49763 221 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 EMDP50402 254 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PRICKLE4Q2TBC4 344 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 DEFB109BQ30KR1 87 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 RPL7L1Q6DKI1 246 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ANKRD16Q6P6B7 361 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 KIRREL2Q6UWL6 708 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 DGAT2L6Q6ZPD8 337 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OLIG3Q7RTU3 272 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ADPRHL1Q8NDY3 354 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 C1QTNF6Q9BXI9 259 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF629Q9UEG4 869 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GAB2Q9UQC2 676 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 XIRP1Q702N8 1843 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CLEC18AA5D8T8 446 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 H7BYZ3 331 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 UBE2MP61081 183 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CCL7P80098 99 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PDZK1IP1Q13113 114 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 HLA-BQ31612 363 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ETFRF1Q6IPR1 90 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF705AQ6ZN79 300 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 C17orf107Q6ZR85 190 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CADM3Q8N126 398 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 FBXL14Q8N1E6 418 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CLEC18CQ8NCF0 446 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 IKZF5Q9H5V7 419 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OCIAD1Q9NX40 245 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GAR1Q9NY12 217 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 LY75O60449 1722 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 RTTNQ86VV8 2226 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM265A0A087WTH1 108 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TOX3O15405 576 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GPM6AP51674 278 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SLC25A1P53007 311 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZNRF4Q8WWF5 429 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PRRX2Q99811 253 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 WNT16Q9UBV4 365 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CD3DP04234 171 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CCR2P41597 374 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 KCNJ3P48549 501 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OXA1LQ15070 435 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 MICBQ29980 383 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM108Q6UXF1 575 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 Q6ZNX1 250 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 PTOV1Q86YD1 416 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 WFDC8Q8IUA0 241 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR5AP2Q8NGF4 316 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR1J1Q8NGS3 322 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR1F12Q8NHA8 337 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SMIM4Q8WVI0 70 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CXorf58Q96LI9 332 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SIGLEC11Q96RL6 698 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMPRSS5Q9H3S3 457 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMEM30CPA0ZSE6 113 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 CCSO14618 274 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 DHHO43323 396 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 FABP6P51161 128 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 UQCC3Q6UW78 93 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 NHLRC2Q8NBF2 726 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 OR5D13Q8NGL4 314 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 RDH5Q92781 318 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SUCNR1Q9BXA5 334 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 BARX1Q9HBU1 254 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SLCO1C1Q9NYB5 712 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 WSB2Q9NYS7 404 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 EMP3P54852 163 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ADAM5Q6NVV9 412 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 SIGLECL1Q8N7X8 197 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZDHHC22Q8N966 263 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 MAFAQ8NHW3 353 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 DOK1Q99704 481 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 FOXB1Q99853 325 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 TMED3Q9Y3Q3 217 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 LRP12Q9Y561 859 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ZNF236Q9UL36 1845 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 LRRC3CA6NJW4 275 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 AQP7P3A6NL99 342 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 KLK10O43240 276 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 AQP8O94778 261 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 GP1BAP07359 652 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ATF1P18846 271 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 RTN4IP1Q8WWV3 396 aaPredicted RBP4.91□□□□□ -1.62
VPS13C-204ENST00000395898 THYN1Q9P016 225 aa4.91□□□□□ -1.62
VPS13C-204ENST00000395898 ANK1P16157 1881 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms