RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 TMEM50BP56557 158 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 TMEM244Q5VVB8 128 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 ADAM19Q9H013 955 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 C5orf63A6NC05 138 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 C5orf52A6NGY3 159 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 K7EPK0 472 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 PLPP3O14495 311 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 RPL12P30050 165 aaKnown RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 SNU13P55769 128 aaKnown RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 TMEM33P57088 247 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 CYCSP99999 105 aaKnown RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 FDX2Q6P4F2 183 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 ST7LQ8TDW4 575 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 LIN37Q96GY3 246 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF251Q9BRH9 671 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 RTBDNQ9BSG5 229 aaPredicted RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 CLEC1BQ9P126 229 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 PIAS3Q9Y6X2 628 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 NSA2O95478 260 aaKnown RBP12.68□□□□□ -0.38
CLIP2-203ENST00000395060 TNFP01375 233 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 HSD11B1P28845 292 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 P2RY4P51582 365 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 BRICD5Q6PL45 260 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 C1QL2Q7Z5L3 287 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 BATF2Q8N1L9 274 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 OR51T1Q8NGJ9 327 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 TMEM59Q9BXS4 323 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 GPR132Q9UNW8 380 aa12.68□□□□□ -0.38
CLIP2-203ENST00000395060 EIF1BO60739 113 aaKnown RBP12.67□□□□□ -0.38
CLIP2-203ENST00000395060 HLA-GP17693 338 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 ACKR3P25106 362 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 EIF1P41567 113 aaKnown RBP12.67□□□□□ -0.38
CLIP2-203ENST00000395060 TNFRSF4P43489 277 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 BIDP55957 195 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 S100A12P80511 92 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 MFAP5Q13361 173 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 NSDHLQ15738 373 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 LIPHQ8WWY8 451 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 SH3BGRL3Q9H299 93 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 SLC26A1Q9H2B4 701 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 TCRBV21S2A2A0A5A6 115 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 FAM221AA4D161 298 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 GIMD1P0DJR0 217 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 HKR1P10072 659 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 FSTP19883 344 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 THRSPQ92748 146 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 SLAMF9Q96A28 289 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF319Q9P2F9 582 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 TINAGQ9UJW2 476 aa12.67□□□□□ -0.38
CLIP2-203ENST00000395060 URB1O60287 2271 aaKnown RBP12.67□□□□□ -0.38
CLIP2-203ENST00000395060 IGHV5-51A0A0C4DH38 117 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 FCGR3AP08637 254 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 PGCP20142 388 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 CRABP1P29762 137 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 SLC26A5P58743 744 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 FXYD4P59646 89 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 TLE3Q04726 772 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 RLN3Q8WXF3 142 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 SDK2Q58EX2 2172 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 IGKV1D-8A0A087WSZ0 117 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 FAM221BA6H8Z2 402 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF727A8MUV8 499 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 ADAM10O14672 748 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 RER1O15258 196 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 JMJD7P0C870 316 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 GABRR1P24046 479 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 EFNA3P52797 238 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 HGFACQ04756 655 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 C5orf46Q6UWT4 87 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 NKAIN3Q8N8D7 197 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 SMIM8Q96KF7 97 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 C2orf50Q96LR7 162 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 GPR84Q9NQS5 396 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 TMEM150CB9EJG8 249 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 UMAD1C9J7I0 102 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 NUDT21O43809 227 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 OR8U8P0C7N1 319 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 HIST1H1DP16402 221 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 ZNF708P17019 499 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 BLVRBP30043 206 aaPredicted RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 RBMXP38159 391 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 RPS10P46783 165 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 CAMLGP49069 296 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 GSK3AP49840 483 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CLIP2-203ENST00000395060 FOXK1P85037 733 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 ACY1Q03154 408 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 PHF19Q5T6S3 580 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 LANCL3Q6ZV70 420 aa12.66□□□□□ -0.38
CLIP2-203ENST00000395060 FAM57BQ71RH2 274 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms